Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3735 ATGAACGTGAGAAGAGGACATTGGCCAACAAACCCTAGCAACAACATTATCAATCTTACTCTCACAACCATTTGCAACCATCTATTCAGTTTAGTTGAGGTGAGAGATTTTAATCCTCACAGGCGTCCTGGTCATTTGGCACATGCTTCTCCTCCTGGTTACTTTGTCCGCTTTGAGAATTCAAATTCCAAAGACGATTCATATTTGAGGAAGAAGACAGGGACAGGGATGCGTCGGTGGCTGTGTTGCACGTGTCAGGTAGAAGAGTCTTACCCATCGCATGAAAGTGAGCACCTGAAAAGCCCAAGGAATTATGGAGATGGCAACCAAAAAGGTTCAAAGGCGTCAGCTCCCGTCAAATCAGAACCACATAAGGCACCACCGCCTATTGAGGTTCCGGCATTATCTTTAGAGGAGCTGAAGGAGAAGACTGAGAATTTTGGATCAAAGGCATTGATTGGTGAAGGATCATATGGAAGAGTGTATTATGCAACCTTAAATGATGGGAAAACAGTGGCTGTGAAAAAGCTTGATGTTTCTATGGTTTCAAGGCTGAAGAACGATAATTTTGTTGAGCTGCAAGGGTATTGTGTTGAAGGAAATCTTCGGTTACTTGCGTATGAGTATGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGGGGCACAACCAGGGCCAACTCTTGATTGGATACAGCGAGTTAGAATTGCAGTTGACGCAGCAAGGGGATTAGAATATTTGCATGAGAAAGTTCAACCCGCTATTATACACAGAGATATCAGATCAAGCAATGTGCTCATCTTTGAAGATTTTAAGGCTAAGATAGCTGATTTTAACCTTTCAAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGCCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGCGTTGTTCTTCTAGAACTTCTTACTGGAAGAAAACCTGTTGATCATACCATGCCCCGCGGACAGCAAAGTCTTGTTACATGGGCTACCCCAAGATTAAGTGAAGATAAAGTTAAACAATGTGTTGACCCAAAACTGAAAGGAGATTATCCCCCTAAAGGAGTTGCCAAGCTTGCAGCCGTTGCGGCCCTGTGCGTGCAATATGAAGCCGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTCAAGACTCCTGCTCCTGCTGCGCCTGAAAGTTGA 1278 0.4405 MNVRRGHWPTNPSNNIINLTLTTICNHLFSLVEVRDFNPHRRPGHLAHASPPGYFVRFENSNSKDDSYLRKKTGTGMRRWLCCTCQVEESYPSHESEHLKSPRNYGDGNQKGSKASAPVKSEPHKAPPPIEVPALSLEELKEKTENFGSKALIGEGSYGRVYYATLNDGKTVAVKKLDVSMVSRLKNDNFVELQGYCVEGNLRLLAYEYATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPAIIHRDIRSSNVLIFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAPAAPES* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3735 425 Gene3D Transferase(Phosphotransferase) domain 1 211 420 - -
Amo19g3735 425 ProSitePatterns Tyrosine protein kinases specific active-site signature. 261 273 IPR008266 GO:0004672|GO:0006468
Amo19g3735 425 SUPERFAMILY Protein kinase-like (PK-like) 125 411 IPR011009 -
Amo19g3735 425 Pfam Protein tyrosine and serine/threonine kinase 152 411 IPR001245 GO:0004672|GO:0006468
Amo19g3735 425 SMART tyrkin_6 147 411 IPR020635 GO:0004713|GO:0006468
Amo19g3735 425 Gene3D Phosphorylase Kinase; domain 1 119 209 - -
Amo19g3735 425 MobiDBLite consensus disorder prediction 93 130 - -
Amo19g3735 425 ProSiteProfiles Protein kinase domain profile. 147 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3735 425 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 63 424 - -
Amo19g3735 425 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Amo19g3735 425 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 63 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3735 Amo-Chr19 152794001 152798252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3735 81 412 Receptor kinase-like Gene Family AT4G02010 46.264 8.39e-90 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Amo19g3735 PK_Tyr_Ser-Thr 5.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3735 K13436 - mnt:21407434 659.448