Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3699 ATGGGATCATGCGTGTCAATAACGGTGGAAGCAGGGCCTTGTGCTCCGATCTCTGAATCAAATGGGAATGAGAATGGCAGAGGAAATGGGAATGAGAAGCGGCGACAGAGGAGGAGGAGGACACAATTACAGCGACAACCACAACCGCATTCAAGCTCAGTTCACCGCGGTTGTTCTTCCTCGTCCGCCGCCTTCGATTACAGGGTGGATGAAGATAGCTTGCATAGAATTCCCGGAAGGATCTTTCTTAATGGATCCACCCGCATTGCTTCCCTGTATTGTAAGCAAGGTAGAAAAGGCCAGAACCAAGATGCTATGCTTCTTTGGGAGAACGTTTGCTCAAAAGAGGACACTGTTTTTTGTGGTGTGTTTGATGGGCATGGACCTCATGGGCATAGGGTTGCAAAGAAAGTGAGGGATTCCTTCCCTCTAATACTTATGGCTGAATGGGATTTGCATCTTCATAACAATAAAGATGGACTCTGCAGCAGTTCTGCAGCTGTAGAGAAACCCAACCTAGAGAGCCATGACACAAATGCTTTGGAGGCAGTTAGAGAATCTTATGTGAAGGCTTGTAAGCTTATGGACAAAGAAATCAACATGCAGAATAATTTTGACTGCTATTGCAGTGGGACTACAGCAGTTACCGTGGTTAAGCAGGGACAGCACCTTGTAATTGGGAATGTCGGGGACTCGAGAGCTGTGTTGTGTACCCGAGATCATGACGATTCTCTTGTTCCTGTTCAGTTAACAACTGACTTTAAGCCAAGTCTTCCAAGGGAAGCAGAGAGGATAAAGCTTTCTAAGGGAAGGGTGTTTGGCCTTCCGAATGAACCAGAGGTAGCTCGAGTATGGCTGCCTAACATCGATTCACCAGGGCTTGCTATGTCGCGAGCTTTCGGAGATTTTTGCCTCAAGGACTTTGGCCTCATCTCTCTTCCTGATGTCTCCTATCATCACATTTCTGACAAGGATGAATTTGTGGTATTAGCTACTGATGGGATTTGGGATGTGTTATCAAACAGAGAAGTACTGGGCATTGTGGGCAGCGTGCCACGATCATGTGCAGCTCGAATCGTCGTGGACTCGGCTGTTCATGCATGGAGGACTAAGTTCCCCGCTGCCAAGATTGATGATTGTTCTGTCGTGTGCCTCTTCTTTGATTCAGATTCAGATCAGGGTAAGTCACCATCCTCTGCAGAAGACATGATGATGATGATGGATGAGCAATCTGAGGTTGGAACTGTTTTATCTGCCACTAACACTATAGTTGGCCCAATGCAACCATTGAGATCAAGAACCAACACCACCTCTAAGTAA 1320 0.4674 MGSCVSITVEAGPCAPISESNGNENGRGNGNEKRRQRRRRTQLQRQPQPHSSSVHRGCSSSSAAFDYRVDEDSLHRIPGRIFLNGSTRIASLYCKQGRKGQNQDAMLLWENVCSKEDTVFCGVFDGHGPHGHRVAKKVRDSFPLILMAEWDLHLHNNKDGLCSSSAAVEKPNLESHDTNALEAVRESYVKACKLMDKEINMQNNFDCYCSGTTAVTVVKQGQHLVIGNVGDSRAVLCTRDHDDSLVPVQLTTDFKPSLPREAERIKLSKGRVFGLPNEPEVARVWLPNIDSPGLAMSRAFGDFCLKDFGLISLPDVSYHHISDKDEFVVLATDGIWDVLSNREVLGIVGSVPRSCAARIVVDSAVHAWRTKFPAAKIDDCSVVCLFFDSDSDQGKSPSSAEDMMMMMDEQSEVGTVLSATNTIVGPMQPLRSRTNTTSK* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3699 439 Gene3D - 85 389 IPR036457 -
Amo19g3699 439 PANTHER ALPHABET, ISOFORM E-RELATED 72 394 - -
Amo19g3699 439 Pfam Protein phosphatase 2C 95 349 IPR001932 -
Amo19g3699 439 SUPERFAMILY PP2C-like 84 388 IPR036457 -
Amo19g3699 439 SMART PP2C_4 80 385 IPR001932 -
Amo19g3699 439 MobiDBLite consensus disorder prediction 45 59 - -
Amo19g3699 439 CDD PP2Cc 88 387 IPR001932 -
Amo19g3699 439 ProSiteProfiles PPM-type phosphatase domain profile. 89 387 IPR001932 -
Amo19g3699 439 MobiDBLite consensus disorder prediction 15 59 - -
Amo19g3699 439 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 72 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3699 Amo-Chr19 152334563 152337322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3699 74 421 PP2C-type Phosphatase Gene Family AT1G16220 51.934 1.47e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3699 - - gmx:100802479 473.396