Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3696 ATGGCAGCTACATTCACCATCACAACAACAGCGGCAGCAACTCTCTCAAATGTTTCAGGAAACAGGAGCAGAATCAGAGGTTTGAACCCTAACCCTAACGCTATCAACACCAGTTCCAGTTGCAGTGCGATTGCTACTTCATCGAAGCACAGGCTCCTCGGGGGGATTCTTCATCCGCGACTGAATGCGATTCCGCTCGTAAGAACCACGAGGCAAAGGGGTTTTGTGCGGGCGAGTTCGGAGGATGCACCACTACAGTCCAAAGTAACTCACAAGGTGTTCTTCGACATCAGCATTGGAAACCCCGTTGGGAAGCTTGCTGGGAGGATTGTGATTGGACTGTTCGGTGACGATGTTCCTCAAACTGCAGAGAATTTCCGCGCCCTCTGCACCGGAGAGAAGGGTTTTGGTTATAAGGGCTCCACCTTCCACCGTGTAATCAAGGATTTCATGATTCAAGGAGGAGACTTTGACAAAGGAAATGGAACTGGAGGCAAAAGTATATACGGGCGCACCTTCAAAGATGAGAATTTTAAACTCTCTCATACTGGACCTGGAGTTGTGAGCATGGCAAATGCAGGCCCCAACACAAATGGAAGTCAGTTTTTCATTTGCACGGTGAAGACACCATGGCTGGATCAGAGGCATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGCTGATTGAGTCGCAGGAGACAGATCGGGGAGACCGTCCAAGAAAGAAGGTTACCATCAGTGACTCTGGTGAGCTTCCAATTGCTTGA 777 0.4903 MAATFTITTTAAATLSNVSGNRSRIRGLNPNPNAINTSSSCSAIATSSKHRLLGGILHPRLNAIPLVRTTRQRGFVRASSEDAPLQSKVTHKVFFDISIGNPVGKLAGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKKVTISDSGELPIA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3696 258 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 65 255 - -
Amo19g3696 258 MobiDBLite consensus disorder prediction 234 258 - -
Amo19g3696 258 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 107 251 IPR002130 GO:0000413|GO:0003755
Amo19g3696 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Amo19g3696 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 155 IPR002130 GO:0000413|GO:0003755
Amo19g3696 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Amo19g3696 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 201 213 IPR002130 GO:0000413|GO:0003755
Amo19g3696 258 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 214 229 IPR002130 GO:0000413|GO:0003755
Amo19g3696 258 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 5, CHLOROPLASTIC 65 255 - -
Amo19g3696 258 MobiDBLite consensus disorder prediction 234 249 - -
Amo19g3696 258 CDD cyclophilin_ABH_like 91 253 - -
Amo19g3696 258 SUPERFAMILY Cyclophilin-like 85 255 IPR029000 -
Amo19g3696 258 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 94 254 IPR002130 GO:0000413|GO:0003755
Amo19g3696 258 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 138 155 IPR020892 GO:0003755|GO:0006457
Amo19g3696 258 Gene3D - 78 257 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3696 Amo-Chr19 152311799 152314480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3696 108 249 U-box Gene Family AT5G67530 48.951 5.25e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3696 K03768 - zju:107417611 363.229