Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3685 ATGCGCTGGAGGTTTCACTCTTTGTTCCTCTTATGCCTCCATTTCTTCCTCCCCTCCACCACCACCCTCTCTTCCCCTTTCTCTCCTTCAGAAAACGTCACTCTCTACGGCGACGCCTTCTTCACCGACCACTCCATCACCCTCACCACCGACCAACTCTCTTGCTCCGAATCTTCTTCTTCTTCTTCGTCTTCTTCTTCATCTTCGAGTTCAGGTGTTGGAAGAGCTTTCTACGTTTACCCTATTCGGTTTCTTGATCCCCAAACAAACTCAACTGCTTCATTCACGTGCCGCTTCTCATTCTCCATCGCCTCCTCCCCTTCTTGCCCCTCCGCCGACGGCATCGCCTTCCTCATTTCCTCCAACACCGACTTCGGAACCCTCTCTCGCGGTTACTTGGGACTCCCTGCAGCCATTCTCGACCAACCACAGCACCAAGACTCTTTCTTCGCCGTCGAATTCGACACGAGCTTCGACCCTGCGCTCGGCGACATCAACGCCAATCACATCGGAATTGATCTCAGCACCGTCGTTTCTTTTGCCTCTGTTGATGCTCTGTCTCGCGGCGTTGACCTCAGGAGCGGGAAAGTCATCAATGCGTGGATTGAGTATAGGGATTCCATGAAGATGGTTCGTGTTTGGGTTTCTTATTCTTCAACTAGGCCTCCAACTCCGATTCTTGCTTCCCAGGTGGATCTTTCTGAGCAACTCAAGGAGTTCATGCATGTTGGATTCTCTGCTTCCAATGGTGGAGGTTCCGGTATTCATGTTATTGATCATTGGCAATTCAAGACTTTGGATTATGGCTCTCGTGAAGAGGTTACCCCTATGGATACCGTTGAAGAAGGGAACTGTGTCTTTTGTTATCCAGGGGAGGGTGATTTGGATTCTGTCTCGTCCATTCGGCGAAACGGCACGCGTCGCAGGCAGCAGAAGATTGGTGAGATGGCTCTTGGATTGGGAGGGATAACTGCATTTCTGGTTTCTGTAGTGGCTGCAGGTTTTGTTATCTCAATTTTCTTGTCAAAGAAGAAAAATAATGGTACTGGAAAGAAAAATTGTAGGTTTCAGACAAGTAAAGTGCCTATGAGATTGTCACTTTCTGAAATCAAATCTGCTACAATGGGGTTTAATCGTGATAGGCTTGTTGGGGAAGGTGCTTCAGCAAAGGTTTACAAAGGGTCACTTCAATGTGGTGGAGATGTTGCAGTGAAGAGGTTTGCCAATGTTGATGGTTTGGATTGTTTGCACAATCCTTTCGCCACTGAATTTGCCACCATGGTGAGTTACTTGAGGCACAAGAATTTGGTTCAGCTTAAGGGATGGTGCTGTGAGGGCAATGAGCTGCTTTTGGTTTATGAGTACTTACCAAATGGCAGCCTCAACAAGGTTCTTCATAGGAACTTCAATTCTTCAATTGTCTTAACATGGAAGCAAAGGGTTAATATAGTTCTTGGAGTTGCTTCTGCTCTTACCTATCTCCATGAAGAATGTGAGAGGCAAATCATTCATAGAGATGTGAAGACTTGCAACATAATGCTTGATGCAGAGTTCAATGCTAAGCTTGGGGATTTTGGACTTGCTGAAGTGTATGAGCATAGTTCTAGCACAAGGGATGCTACTATACCAGCAGGAACAATGGGTTACCTTGCACCGGAATACGTGTACTCCGGTGTTCCGACAGTGAAGACTGATGTTTACAGCTTTGGTGTGGTGGTGTTGGAGGTGGCTACAGGGAGGAAGCCAGTGGAGGATGATGGAACCGTGGTTGCGGATTTCGTGTGGGGATTGTGGGAGAAGAACAGGCTCATTGATGCTGCTGATCCAAGATTGAAGGGTAACTTTGATGTACTAGAGATGGAGAGGATGCTGTTGGTGGGGCTTGTTTGTGTTCATCCTGATTATGAGAAGAGGCCAAGGGTGAGAGATGCAGCTAGAATTCTCAAGAAAGAAGCGCCACTTCCATCATTGCCATTGACTAAGCCTAGGGTGAGAATTAGGCCTGTTTGTCCAAATGATACACCAGAGACACAGAATGCTGTTGTTGGGGATTGGTTAAGTTCTGATGATGCTCCTTATTTGACTCCTAGGAGCCAGTTTTACTAG 2106 0.471 MRWRFHSLFLLCLHFFLPSTTTLSSPFSPSENVTLYGDAFFTDHSITLTTDQLSCSESSSSSSSSSSSSSSGVGRAFYVYPIRFLDPQTNSTASFTCRFSFSIASSPSCPSADGIAFLISSNTDFGTLSRGYLGLPAAILDQPQHQDSFFAVEFDTSFDPALGDINANHIGIDLSTVVSFASVDALSRGVDLRSGKVINAWIEYRDSMKMVRVWVSYSSTRPPTPILASQVDLSEQLKEFMHVGFSASNGGGSGIHVIDHWQFKTLDYGSREEVTPMDTVEEGNCVFCYPGEGDLDSVSSIRRNGTRRRQQKIGEMALGLGGITAFLVSVVAAGFVISIFLSKKKNNGTGKKNCRFQTSKVPMRLSLSEIKSATMGFNRDRLVGEGASAKVYKGSLQCGGDVAVKRFANVDGLDCLHNPFATEFATMVSYLRHKNLVQLKGWCCEGNELLLVYEYLPNGSLNKVLHRNFNSSIVLTWKQRVNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDAEFNAKLGDFGLAEVYEHSSSTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTVVADFVWGLWEKNRLIDAADPRLKGNFDVLEMERMLLVGLVCVHPDYEKRPRVRDAARILKKEAPLPSLPLTKPRVRIRPVCPNDTPETQNAVVGDWLSSDDAPYLTPRSQFY* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3685 701 CDD STKc_IRAK 383 650 - -
Amo19g3685 701 CDD lectin_legume_LecRK_Arcelin_ConA 27 265 IPR001220 GO:0030246
Amo19g3685 701 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 19 666 - -
Amo19g3685 701 Pfam Legume lectin domain 27 266 IPR001220 GO:0030246
Amo19g3685 701 ProSiteProfiles Protein kinase domain profile. 377 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3685 701 Gene3D Transferase(Phosphotransferase) domain 1 456 653 - -
Amo19g3685 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 265 IPR013320 -
Amo19g3685 701 Gene3D Phosphorylase Kinase; domain 1 337 455 - -
Amo19g3685 701 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Amo19g3685 701 Pfam Protein kinase domain 378 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3685 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Amo19g3685 701 Gene3D - 20 279 - -
Amo19g3685 701 SMART serkin_6 377 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3685 701 SUPERFAMILY Protein kinase-like (PK-like) 355 648 IPR011009 -
Amo19g3685 701 PANTHER - 19 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3685 Amo-Chr19 152156232 152158337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3685 5 700 Receptor kinase-like Gene Family AT5G42120 54.839 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo19g3685 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3685 - - gmx:100783805 975.311