Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3661 ATGGTATCGAGAGGGCTGTTCGGTTGGTCCCCGCCGCACATACAGCCTCTCACTCCGGTGTCTGAGGTTTCGGAGCCGCCGGAGTCGCCGTCTCCGTATATTGATCCCGGTGCCGAGACTTCGGCGTCGCAGCAGGTTGAGGTGGAGGAGGAGATCGAGGAGCCAGAGGAGGTTGAGCCGCCGCCAGCTGCCGTGCCTTTCTCCCGCCTCTTCGCCTGCGCCGATCGTTTTGACTGGTTCCTTATGATCCTCGGCTCCGTCGCCGCCGCAGCTCACGGCACCGCTCTCGTCGTTTACTTGCATTTCTTTGCCAAAATCATCCATGTTCGTCAGCAAGATGACCAGTTTCACAGGTTCAAGGAGCTGGCTTTAACCATTGTTTATATTGCTGGGGGAGTTTTTGCCGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACCGGAGAACGGCAGACTGCTGTTATTAGGTCAAAATATGTTCAAGTATTGCTTAATCAAGATATGAGCTTTTTTGATACTTATGGGAATAATGGAGATATCGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAGTCTGCACTTAGTGAAAAGGTTGGGAATTATATTCATAACATGACTACATTCTTCAGTGGTCTTGTTATTGGTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGTCCATTTATCGTTGCGGCAGGAGGAATATCAAATATATTCCTTCATAGGCTTGCTGAGAATATCCAGGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAATTTCGTATATAAGGACCTTGTATGCATTTACAAATGAAACTCTGGCTAAATATTCATATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATCAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTGTGCACAGAAAAGCTCATGGTGGTGAAATTATAACAGCTTTGTTTGCTGTGATTCTAAGTGGCTTGGGATTGAATCAAGCGGCGACGAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCTTATAGATTGTTTGAGATGATAAGCCGGTCATCCTCATCTTTTAATCATGATGGCAGTGCCCCTGCTTCAGTGCAAGGGAATATAGAGTTCCGCAATGTTTATTTCAGTTATCTTTCTCGTCCTGAAATCCCTATCTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAGAAAGCTGTGGCACTTGTTGGCAGAAATGGCTCTGGCAAAAGTAGTATTATTCCACTCATGGAGCGATTCTATGATCCTACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGCTTAGAAGCCAAATTGGACTGGTCACCCAGGAACCTGCATTGCTCAGTTTGAGTATAAGAGACAACATTGCTTATGGGAGGGATGCAACCATGGATCAAATTGTAGAGGCTGCTAAAATAGCTCATGCACATGCGTTTATCAGCTCGTTAGATAAAGGTTATGACACTCAGGTTGGGAGGGCTGGTATAGCTTTGACAGAAGAGCAGAAAATAAAACTATCTGTTGCAAGAGCTGTGCTTTTGAATCCATCGATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCCCTTGATCTACTTATGTTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTCATACGTAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTATTAAGCCGGGATGGCTTATATGCAGAGCTTCTTCGCTGTGAAGAGGCCACAAAACTTCCCAAAAGGATGCCTATTCGGAACTACAAGGATGCTGGAGTTTTCCAAATTGAGAAAGATTCTTCAGAAAGTTTGAGAGAACCATCATCCCCCAAAATGAATAAATCACCCTCTCTTCAAAGAATTGCTGGAGTATTTCGGCCTTCGGATGGCTTCTTTAACTCACAAGATTCACCAAAAGCACGGAGCCCACCACCTGAGATGATGCTAGAAAATGGTGCAGATAAGGAGCCATCGATAAAAAGGCAGGACAGTTTTGAAATGAGACTGCCAGAGCTGCCCAAGATTGATGTCCAGTCTGTGAATCGACAAGCATCAAATGGTTCCGACCCGGAATCCCCTATTTCACCTCTATTAACGTCTGATCCTAAAAATGAACGCTCTCATTCCCAGACTTTTAGTAGGCCAGAGAGTCATTCTGATGATATGTCAGTGAAAATGGATCTAACAAAGGATGCACGACATCGGGGGCAACCCTCACTTTGGAGGCTTGCTGAGCTTAGTTTGGCTGAGTGGCTTTATGCTGTGTTAGGAAGCACGGGTGCTGCTATCTTTGGTTCTTTCAACCCACTTCTTGCTTATGTTATTGGCATGGTGGTGACGGCTTACTATAGAATTGATGAGGCAAATCACTTGCAGGGGGAAGTAAACAAGTGGTGCTTGGTCATTGCTTGCATGGGCGTCGTGACAGTTATTGCCAACTTTTTGCAGCATTTCTACTTTGGCATTATGGGGGAGAAAATGACAGAAAGAGTCAGGAGAATGATGTTTTCGGCCATGCTACGCAATGAAACTGGATGGTTCGATGAAGAGGAAAACAGTGCTGACAATTTATCCATGCGCTTGGCGAATGATGCTACATTTGTTCGAGCAGCTTTTAGCAATCGACTTTCAATATTTGTACAGGACAGTGCTGCAGTTATTGTTGCTTTTCTCATTGGTGTTTTGCTCCAATGGCGATTAGCACTTGTGGCTTTAGCAACACTTCCAGTTCTTTGTATCTCTGCATTTGCACAGAAACTGTGGCTTGCTGGCTTTTCAAGAGGTATACAGGAAATGCACAGAAAGGCTTCTTTGGTTCTTGAAGATGCTGTTAGAAATATTTACACTGTTGTTGCATTTTGTGCTGGTAACAAGGTTATGGAGCTCTACAGGCTGCAGTTAAATAAGATATTTATGAAGAGCTTTCTTCATGGAGTGGCCATCGGTTTTGGATTTGGTTTTTCGCAGTTTCTACTCTTCGCTTGCAATGCCCTTCTACTTTGGTACACAGCAACATGTATAAATAATGGATATGTGCATCCACCTACTGCACTCAAGGTGTACATGGTTTTCTCGTTTGCTACATTTGCACTTGTGGAGCCTTTTGGCTTGGCTCCTTACATACTTAAACGACGCAAATCTCTCATATCGGTGTTTGAAATTATAGACCGTGTACCTAACATTGATCCTGATGATAGCTCTGCAGTGAAGCCTCCCAATGTATATGGAAGCATTGAATTGAAAAATGTTGATTTCTGTTACCCTTCTCGGCCAGAAGTGTTGGTCTTGAGCAATTTCAGTTTGAAAGTCAATGGGGGACAAACAATTGCTGTTGTGGGAGTTTCTGGGTCTGGAAAGAGCACTATAATATCTTTGATAGAAAGATTTTATGATCCAGTTGCTGGGCAAATTTTTCTAGACGGGAGGGATTTAAAGCTATATAATTTAAGATGGTTGAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCTATTATTTTCTCAACCACTGTAAGGGAAAACATCCTATATGCCAGGCACAATGCCAGTGAAGCTGAGGTGAAAGAGGCCGCAAGAATAGCAAATGCTCATCATTTCATTAGCAGTTTGCCTCATGGTTATGACACACATGTTGGGATGAGAGGTGTTGACTTAACTCCAGGACAGAAACAGAGAATTGCAATTGCTCGGGTAATTTTGAAAAATGCACCTATCTTATTGTTGGATGAAGCCAGTTCATCTATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTGGACACACTAGTCATGGGGAACAAGACCACTATTTTAATAGCGCACAGGGCTGCAATGATGAGACACGTAGATAACATTGTAGTCCTTAATGGAGGAAGGATAGTGGAGTCGGGAAGCCACGATTCACTGGTTGCAAAGAATGGCCTGTATGTCCGATTGATGCAACCTCATTTTGGCAAGGCATTGCGTCAGCGTCGGCTCATTTAG 4167 0.4368 MVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYIDPGAETSASQQVEVEEEIEEPEEVEPPPAAVPFSRLFACADRFDWFLMILGSVAAAAHGTALVVYLHFFAKIIHVRQQDDQFHRFKELALTIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMTTFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAISYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVVHRKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFNHDGSAPASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIVEAAKIAHAHAFISSLDKGYDTQVGRAGIALTEEQKIKLSVARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLSRDGLYAELLRCEEATKLPKRMPIRNYKDAGVFQIEKDSSESLREPSSPKMNKSPSLQRIAGVFRPSDGFFNSQDSPKARSPPPEMMLENGADKEPSIKRQDSFEMRLPELPKIDVQSVNRQASNGSDPESPISPLLTSDPKNERSHSQTFSRPESHSDDMSVKMDLTKDARHRGQPSLWRLAELSLAEWLYAVLGSTGAAIFGSFNPLLAYVIGMVVTAYYRIDEANHLQGEVNKWCLVIACMGVVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFVQDSAAVIVAFLIGVLLQWRLALVALATLPVLCISAFAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNKIFMKSFLHGVAIGFGFGFSQFLLFACNALLLWYTATCINNGYVHPPTALKVYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPNIDPDDSSAVKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIERFYDPVAGQIFLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTVRENILYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVILKNAPILLLDEASSSIESESSRVVQEALDTLVMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVESGSHDSLVAKNGLYVRLMQPHFGKALRQRRLI* 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3661 1388 MobiDBLite consensus disorder prediction 768 784 - -
Amo19g3661 1388 MobiDBLite consensus disorder prediction 714 731 - -
Amo19g3661 1388 SMART AAA_5 1166 1353 IPR003593 -
Amo19g3661 1388 SMART AAA_5 426 605 IPR003593 -
Amo19g3661 1388 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 816 1092 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo19g3661 1388 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1139 1376 IPR003439 GO:0005524
Amo19g3661 1388 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 399 634 IPR003439 GO:0005524
Amo19g3661 1388 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 83 366 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo19g3661 1388 PANTHER ABC TRANSPORTER B FAMILY 19 1384 - -
Amo19g3661 1388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 633 IPR027417 -
Amo19g3661 1388 MobiDBLite consensus disorder prediction 1 61 - -
Amo19g3661 1388 SUPERFAMILY ABC transporter transmembrane region 803 1124 IPR036640 GO:0005524|GO:0016021
Amo19g3661 1388 Gene3D ABC transporter type 1, transmembrane domain 69 644 IPR036640 GO:0005524|GO:0016021
Amo19g3661 1388 CDD ABC_6TM_Pgp_ABCB1_D2_like 807 1122 - -
Amo19g3661 1388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1128 1375 IPR027417 -
Amo19g3661 1388 CDD ABC_6TM_Pgp_ABCB1_D1_like 82 374 - -
Amo19g3661 1388 MobiDBLite consensus disorder prediction 660 784 - -
Amo19g3661 1388 Gene3D ABC transporter type 1, transmembrane domain 929 1128 IPR036640 GO:0005524|GO:0016021
Amo19g3661 1388 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1384 - -
Amo19g3661 1388 MobiDBLite consensus disorder prediction 739 767 - -
Amo19g3661 1388 Gene3D - 389 636 IPR027417 -
Amo19g3661 1388 Gene3D - 1129 1376 IPR027417 -
Amo19g3661 1388 Pfam ABC transporter 1157 1305 IPR003439 GO:0005524
Amo19g3661 1388 Pfam ABC transporter transmembrane region 824 1087 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo19g3661 1388 Pfam ABC transporter transmembrane region 82 349 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo19g3661 1388 Coils Coil 245 265 - -
Amo19g3661 1388 SUPERFAMILY ABC transporter transmembrane region 68 374 IPR036640 GO:0005524|GO:0016021
Amo19g3661 1388 Pfam ABC transporter 420 564 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3661 Amo-Chr19 151773705 151782302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3661 52 697 Calmodulin-binding Proteins AT2G36910 42.988 4.34e-163 522