Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3646 ATGGGATCATGCGTGTCAATAACGGTGGAAGCAGGGCCTTGTGCTCCGATCTCTGAATCGAATGGGAATGAGAATGGCAGAGGAAATGGGAATGAGAAGCGGCGACAGAGGAGGAGGAGGACACAATTACAGCGACAACCACAACCGCATTCAAGCTCAGTTCACCGCGGTTGTTCTTCCTCGTCCGCTGCCTTCGATTACAGGGTGGATGAAGATAGCTTGCATAGAATTCCCGGAAGAATCTTTCTCAATGGATCCACCCGCATTGCTTCCCTGTATTGTAAGCAAGGTAGAAAAGGCCAGAACCAAGATGCTATGCTTCTTTGGGAGAACGTTTGCTCAAAAGAGGACACTGTTTTTTGTGGTGTGTTTGATGGGCATGGACCTCATGGGCATAGGGTTGCAAAGAAAGTGAGGGATTCCTTCCCTCTAATACTTATGGCTGAATGGGATTTGCATCTCCATAACAATAAAGATGGACTCTGCAGCAGTTCTGCAGCTGAAGAGAAACCCAACCTAGAGAGGCATGACACAAATGCTTTGGAGGCAGTTAGAGAATCTTATGTGAAGGCTTGTAAGCTTATGGACAAAGAAATCAACATGCAGAATGATTTTGACTGCTATTGCAGTGGGACTACAGCAGTTACCGTGGTTAAGCAGGGACAGCACCTTGTAATTGGGAATGTTGGGGACTCGAGAGCTGTGTTGTGTACCCGAGATCACGACGATTCTCTTGTTCCTGTTCAGTTAACAACTGACTTTAAGCCAAGTCTTCCAAGGGAAGCAGAGAGGATAAAGCTTTCTAAGGGAAGGGTGTTTGGCCTTCCGAATGAACCAGAGGTAGCTCGAGTATGGCTGCCTAACATCGATTCACCAGGGCTTGCTATGTCGCGAGCTTTCGGAGATTTTTGCCTCAAGGACTTTGGCCTCATCTCTCTTCCTGATGTCTCCTATCATCACATTTCTGACAAGGATGAATTTGTGGTATTAGCTACTGATGGGATTTGGGATGTGTTATCAAACAGAGAAGTACTGGGCATTGTGGGCAGCGTGCCACGATCATGTGCAGCTCGAATCGTCGTGGACTCAGCTGTTCATGCATGGAGGACTAAGTTCCCCGCTGCCAAGATTGATGATTGTTCTGTCGTGTGCCTCTTCTTTGATTCAGATTCAGATCAAGGTAAGTCACCATCCTCTGCAGAAGACATGATGATGATGATGATGATGATGGATGAGCAATCTGAGGTTGGAACTGTTTTATCTGCCACTAACACTATAGTTGGCCCAATGCAACCATTGAGATCAAGAACCAACACCACATCTAAGTAA 1329 0.4658 MGSCVSITVEAGPCAPISESNGNENGRGNGNEKRRQRRRRTQLQRQPQPHSSSVHRGCSSSSAAFDYRVDEDSLHRIPGRIFLNGSTRIASLYCKQGRKGQNQDAMLLWENVCSKEDTVFCGVFDGHGPHGHRVAKKVRDSFPLILMAEWDLHLHNNKDGLCSSSAAEEKPNLERHDTNALEAVRESYVKACKLMDKEINMQNDFDCYCSGTTAVTVVKQGQHLVIGNVGDSRAVLCTRDHDDSLVPVQLTTDFKPSLPREAERIKLSKGRVFGLPNEPEVARVWLPNIDSPGLAMSRAFGDFCLKDFGLISLPDVSYHHISDKDEFVVLATDGIWDVLSNREVLGIVGSVPRSCAARIVVDSAVHAWRTKFPAAKIDDCSVVCLFFDSDSDQGKSPSSAEDMMMMMMMMDEQSEVGTVLSATNTIVGPMQPLRSRTNTTSK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3646 442 Gene3D - 85 389 IPR036457 -
Amo19g3646 442 PANTHER ALPHABET, ISOFORM E-RELATED 72 394 - -
Amo19g3646 442 SUPERFAMILY PP2C-like 85 388 IPR036457 -
Amo19g3646 442 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 72 394 - -
Amo19g3646 442 MobiDBLite consensus disorder prediction 45 59 - -
Amo19g3646 442 Pfam Protein phosphatase 2C 95 349 IPR001932 -
Amo19g3646 442 CDD PP2Cc 88 387 IPR001932 -
Amo19g3646 442 SMART PP2C_4 80 385 IPR001932 -
Amo19g3646 442 ProSiteProfiles PPM-type phosphatase domain profile. 89 387 IPR001932 -
Amo19g3646 442 MobiDBLite consensus disorder prediction 15 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3646 Amo-Chr19 151472939 151475693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3646 74 394 PP2C-type Phosphatase Gene Family AT1G16220 54.328 9.60e-132 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3646 - - gmx:100802479 476.092