Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3626 ATGGAGAAATCCTTCAGTTTTTCATCATATCATTTTAGCGCTGCTTCTCAGAAACAGAGAGACAAGGATTTGGAATCATCATCATCCACTCGCGGCGGTCCTCAATGGAAATCAGCCGGAGGAGAGGAGGAACTGGCGGCATTCTTCCAGGACCACGACACCATCCTACAAGTTTCCGAGGAAGTGGATGGTTTCCTTGAAACCAGTGCCACCACTCCTCCTCTTCTACAAGTCCCTGATTGCGTCCACCGTCTAACCAAGATATTGGATTCCATGGTGTATAGATACAACACCGGTAAAAGCAAGTTGGGCAAAGATGCAGAAGATGATGACTTGTTTCTCGCCGTTGTGGATCGCATCTCAAAGATCTCTGCTATTCTCTCTACCTTCCCCTGTGATCCCTCTGTCTTGGACAAAACTACCTTCTCCTTGGAAAAAGCTATGTCGTTCTTGGAGAAACATCTCTGCACCATTTTACAGGATCCAAAATCATCCACCACCACCACCACCCCTACCTCCAGCTACCACGGCAGCTTTCGATCCGGATCCGGATCCGAATCCAAACCTAAACCTCCTAAAAAATCATCATCCTTCGGTTCTCTTACTCAAGTTCATGATGCGGCGCTTTGTTCTCCCTTTGACCTTGTAAATCTCAGTGATCCTCCTATAATACCTACTCTATCGTCTCATCAGGATCAAGATCAAGATACAACGTTCCCTGCATTCTCTCCGGAGAAAGTTTCACTCATGAACAAGATCGCCAGCGCCATGATCGCCGCGGGATATCAAACGGAGTGTTGCGTGGCTTTCGCCAGCTTCAGGAGGATCGCCTTCAAAACCGCGCTGCAAGAGTTCGGGTACGTGAGCGTAGGCATGGAAGAGATCCATAAAATGCAATGGGAAATGCTGGAAGGAGAGATTGCCACGTGGAACAACGCGGTTCGACATTGCATAACCGTTTTGTTCAACGGCGAAAAAAAGCTCTACGCCTCAGTTTTCCCCAATCAACAATCCATATCTCAAAACCTCTTGAGCGATCTTGCACGCGCCGTAATCATTCATTTCCTGAACTTCGCACAAGGTGTCGTGTTAACATTGCTCACCGTAGAGAAGCTGTTCAAGTTTCTAGACATGTATGAGACGCTGAGGGACGTGGTGGAGATCGCCATCGCCGACGGTTCTTACTTAGAGAGGTGCAGGAAGGAGCTGGCGCACGAGATAGCCACCACCAAGCTTCGAATAGCAGAGGCCACCATGGCCATGTTTCGCGACTTGGAAAATTCCGTTAAGGGTGACAACGACAGGGTTCCGGTTCCTAACGGCGCAATTCATCCATTGACGCGCTATGTGATGAATTATCTGGAGTATGCTTGCGAGTACAAGGACACATTGGAACAAGTTCTGCGACAATGCCTTCAGGATGATTATCATACTTGCCGTTATTACAGTCCTATCCGCAAAATCGAGTTAGAGGAGGACGATGGAACGCCTAAGAATTCAGCCTTGGCGATTCAGTTAATGACAATCATGGACCTGTTGAGCTTGAATCTTGAGTACAAGGCCATGTTGTATAAGGATTTTGCATTGAGAAGTGTTTTCTTGATGAATAATGGGAGGTACATAGTGCAGAAGGTGAAAGGGTGCAAAGATCTTCACCTATGCATGGGTGACAATTGGTGTAGAAAGAGGCAATCCGGGTTAAAACTGCACCATAAAAATTACCGGACAGAAACATGGTCTAAGGTTTTGAACTGCCTTAGTACAGATGGACTTCAAGGAAACACGAGTAGTGTGTTAAGCCCGAGAGCCAATAAAGATAAAAAGCCAAAACAAGAGCTAAAAGATAAGTTTAAACGTTTCAATAGCACGTTTGAAGATATATATAAAACGCAGAGTTCTTGGGTGGTTAGTGATGAACAGCTTAAGTCTGAGCTCAGAGCTTCAATAGCTGCTTTGGTGATCCCAGCTTACCGCTCCTTTTATGGCAGATTCAAGCACCATTTAAATTCTAGTAGACATGTTGACAAGTATATTAAGTATCATCCTGAAGATATTGAGGCTATAATTGAAGAACTATTTGATGGGGGTACTACTAAAAGGAAATCGTGA 2109 0.4557 MEKSFSFSSYHFSAASQKQRDKDLESSSSTRGGPQWKSAGGEEELAAFFQDHDTILQVSEEVDGFLETSATTPPLLQVPDCVHRLTKILDSMVYRYNTGKSKLGKDAEDDDLFLAVVDRISKISAILSTFPCDPSVLDKTTFSLEKAMSFLEKHLCTILQDPKSSTTTTTPTSSYHGSFRSGSGSESKPKPPKKSSSFGSLTQVHDAALCSPFDLVNLSDPPIIPTLSSHQDQDQDTTFPAFSPEKVSLMNKIASAMIAAGYQTECCVAFASFRRIAFKTALQEFGYVSVGMEEIHKMQWEMLEGEIATWNNAVRHCITVLFNGEKKLYASVFPNQQSISQNLLSDLARAVIIHFLNFAQGVVLTLLTVEKLFKFLDMYETLRDVVEIAIADGSYLERCRKELAHEIATTKLRIAEATMAMFRDLENSVKGDNDRVPVPNGAIHPLTRYVMNYLEYACEYKDTLEQVLRQCLQDDYHTCRYYSPIRKIELEEDDGTPKNSALAIQLMTIMDLLSLNLEYKAMLYKDFALRSVFLMNNGRYIVQKVKGCKDLHLCMGDNWCRKRQSGLKLHHKNYRTETWSKVLNCLSTDGLQGNTSSVLSPRANKDKKPKQELKDKFKRFNSTFEDIYKTQSSWVVSDEQLKSELRASIAALVIPAYRSFYGRFKHHLNSSRHVDKYIKYHPEDIEAIIEELFDGGTTKRKS* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3626 702 Pfam Exo70 exocyst complex subunit 309 691 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo19g3626 702 PANTHER EXOCYST COMPLEX PROTEIN EXO70 44 696 IPR004140 GO:0000145|GO:0006887
Amo19g3626 702 MobiDBLite consensus disorder prediction 1 15 - -
Amo19g3626 702 MobiDBLite consensus disorder prediction 162 199 - -
Amo19g3626 702 Gene3D Exocyst complex component Exo70 94 701 - -
Amo19g3626 702 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 44 696 - -
Amo19g3626 702 MobiDBLite consensus disorder prediction 1 39 - -
Amo19g3626 702 SUPERFAMILY Cullin repeat-like 104 694 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3626 Amo-Chr19 151232009 151234117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3626 55 698 EXO70 exocyst subunit family AT5G13150 41.501 3.02e-168 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3626 K07195 - adu:110275432 1345.1