Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3608 AGGGATGTTCTTGGTAATACAATTCATCAATTTCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTGAAAGCCCCAGGTCGAGAATTTACAGGAATTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTCAGAAGCAGAGGCACATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAAGCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGGCAAGCGTGAAAATGTTTTACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAGCAAAATCTGGTAGCTGGGTTGTTACACATTTTGTAAAGGAACACACACACCCTCTTGCTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATTCGGGCGAACGGGATAGAATTCGAAAATTAAATCAGCAGTTGACAGCAGAGAAAAAGAGGTCTGTCACCTACAAAAGACATCTTGAATTGATACTCGAGCATATTGACGAGTATAACGAGAGCCTATCAAAGAAAATACAGCACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATTAGCCACCCTTTAA 708 0.4167 RDVLGNTIHQFPDSKSQSFENLQELTAGKVAANLESPRSRIYRNSPVEPYVGQEFESEAEAHAFYNAYATSVGFIVRVSKARSRIDNSAIGRIFVCNKEGYRMTGKRENVLRQRAETRVGCKAMIMVRKAKSGSWVVTHFVKEHTHPLAGPGGGRRDFIYEQYSGERDRIRKLNQQLTAEKKRSVTYKRHLELILEHIDEYNESLSKKIQHIVDNVKEMESKEEQSQLNFQLATL* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3608 235 Pfam FAR1 DNA-binding domain 64 148 IPR004330 -
Amo19g3608 235 Coils Coil 202 222 - -
Amo19g3608 235 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 225 - -
Amo19g3608 235 Coils Coil 160 183 - -
Amo19g3608 235 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 32 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3608 Amo-Chr19 150987634 150988581 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g3608 FAR1 5.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3608 - - adu:107476765 365.155