Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3589 ATGGCATTGACTCCACCACCTCATACAACAAGAGAAGAGGAACAACAACACAATAACAATAATGGGTGCCACATGAACCTCGCTATCTCCCCAAACTGCACCGGGGAGACACAAGCAAATTTGAGTGCTGTCATTAATCACTATGTCCACACTCTAAATCACTTCAACTTGCGCAACTTGGGGTACCCCACGAATCAGAATTTCAACTACGATGCATTGGCACCATTGCTACAATTTCACCTAAACAATGCAGGTGATCCATTTGTTGGGAGCAGCTTCCGTCTAAATTCAACGTCATTTGAAGTTAGTGCTCTTGATTGGTTCGCTAATTTGTGGGACATACAAAAGAACAAGTATTGGGGATACGTCACTACTGGTGGAACAGAGGCCAATCTTCACGCCATTTTAGTAGGGAGAGAACAATTTCCTGATGGGGTTCTATATACTTCAGAAGATTCACATTATTCAATATTTAAAATAGCAAGAATATATCGAATGCAATGTGTCAAAGTTAGATCTCTTATCTCCGGTGAGATTGACTGTGCTGATCTAAAAGCTTCACTACTTCATCACAAGGACAGGCCAGCCATCATCAATCTTAACATAGGTACAACGATGAAAGGAGCTGTTGATGACATTGATCTTGTAATAAAAACACTTGAGGAAAGTGGTTTCAATCGTGATAGATTCTACATTCACTGTGATGCAGCTCTATTTGGAATCATGCTCCCTTTTCTCAAAGCAGCATCAAAGATAATAAGTTTCAAGAAACCCATTGGAAGTGTGAGTGTTTCAGGGCATAAATTCTTGGGATGTCCAATTCCCTGTGGGGTTGTAATAACGCGTTCAGAATACATTAATGCGTCATCAAGGGATGTTGAAATCATTGGTTCAAGGGATGCAACAATCACAGGTAGTCGATGTGGACATGCTCCAATCTTCCTTTGGTATGCTATCAAAAAGAAAGGCTCAATAGGGATTCAAAACGAAGTGGAAAATTGCATAGCAAATGCACGTTACTTGCACAATCGACTAAGTGATGCTGGAATTGGTGCAATGTTAAATGAGTATAGCAACATTGTTGTGTTTGAGAGGCCTCTTGATCATCAATTTAGCCGTAGGTGGAACTTGGCGTGCCAAGGGAACATTGCACACGTGGTGGTCATGCAACATGTTACCATTCAAATGTTGGATTCTTTTGTTAATGAGTTTCTTCATAAACGTTCCTTTTCACGGTTTGAGGATTATGGCTCTTTTCAGCCTCTGTGCATAGCAGAAAAACCACAAGCCAATTTGAGTGCCGTCATTAATCACTATTTCCACACTGTAAATCACTTCAACTTGCGCAACTTGGGCTACCCCGGTAATCAGAATTTCAACTACGATGCGTTGGTACCATTGCTACAATTTCATCTAAACAATGCAGGTGATGCATTTGTTGGGACCGGCTGCTCTCTAAATTCAACATCGTTTGAAGTTAGTGTTCTTGATTGGTTTGCTAATTTGTGGAACATACAAAAAGATAAGTATTGGGGATGCATTACTACTGGTGGAACTGAAGCCAATCTTCACGCCATTTTAGTAGGAATGTACCGAGTGCAATGTGTCAAAGTTAGAACTTTTGTCTCCGGTGAGATTGACTGTGCTGATCTAAAAGCTTCACTACTTCATCACAAGGACAAGCCAGCCATAATCAATCTTAACATAGGCACAACGATGAAAGGAGCTGTTGACGACGTTGATCTTGTAATAAAAACACTTGAGGAAACTGGTTTCAGTCGTGATAGATTCTACATCCACTGTGATGGAGCTCTATTTGGAATCATGCTCCCTTTTCTCAAAGCAGTGAGGATTCAAAACGAAGTGGAAAATTGCATAGCCAATGCACGTTACTTGCACAATCGACTAAGTGATGCTGGAATTGGTGCAATGTTAAATGAGCATAGCAACATTGTTGTGTTTGAGAGGCCTCTTGATCATCAATTTAGCCGTAGGTGGAGCTTGGCGTGCCAAGGAAACATTGCACACGTGGTGGTCATGCAGCATGTTACCATTCAAATGTTGGATTCTTTTGTTACTGAGTTTCTTCATAAACGATCATTTTCACGGTTCGAGGATTATGGCTCTTTTCAGCCTCTGTGCATAGCAGAAGAAGTTGGCGCTGCAAATTGTTCTTGCTCAATGCACAATTTGAAATCTTGA 2202 0.4096 MALTPPPHTTREEEQQHNNNNGCHMNLAISPNCTGETQANLSAVINHYVHTLNHFNLRNLGYPTNQNFNYDALAPLLQFHLNNAGDPFVGSSFRLNSTSFEVSALDWFANLWDIQKNKYWGYVTTGGTEANLHAILVGREQFPDGVLYTSEDSHYSIFKIARIYRMQCVKVRSLISGEIDCADLKASLLHHKDRPAIINLNIGTTMKGAVDDIDLVIKTLEESGFNRDRFYIHCDAALFGIMLPFLKAASKIISFKKPIGSVSVSGHKFLGCPIPCGVVITRSEYINASSRDVEIIGSRDATITGSRCGHAPIFLWYAIKKKGSIGIQNEVENCIANARYLHNRLSDAGIGAMLNEYSNIVVFERPLDHQFSRRWNLACQGNIAHVVVMQHVTIQMLDSFVNEFLHKRSFSRFEDYGSFQPLCIAEKPQANLSAVINHYFHTVNHFNLRNLGYPGNQNFNYDALVPLLQFHLNNAGDAFVGTGCSLNSTSFEVSVLDWFANLWNIQKDKYWGCITTGGTEANLHAILVGMYRVQCVKVRTFVSGEIDCADLKASLLHHKDKPAIINLNIGTTMKGAVDDVDLVIKTLEETGFSRDRFYIHCDGALFGIMLPFLKAVRIQNEVENCIANARYLHNRLSDAGIGAMLNEHSNIVVFERPLDHQFSRRWSLACQGNIAHVVVMQHVTIQMLDSFVTEFLHKRSFSRFEDYGSFQPLCIAEEVGAANCSCSMHNLKS* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3589 733 Gene3D - 531 627 IPR015421 GO:0003824
Amo19g3589 733 PANTHER SERINE DECARBOXYLASE 429 616 - -
Amo19g3589 733 Gene3D - 469 530 IPR015421 GO:0003824
Amo19g3589 733 PANTHER SERINE DECARBOXYLASE 617 729 - -
Amo19g3589 733 SUPERFAMILY PLP-dependent transferases 53 404 IPR015424 -
Amo19g3589 733 PANTHER - 429 616 - -
Amo19g3589 733 PANTHER - 12 426 - -
Amo19g3589 733 PANTHER SERINE DECARBOXYLASE 12 426 - -
Amo19g3589 733 Gene3D Aspartate Aminotransferase, domain 1 320 408 IPR015422 GO:0003824
Amo19g3589 733 PANTHER - 617 729 - -
Amo19g3589 733 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 261 282 IPR021115 GO:0016831
Amo19g3589 733 MobiDBLite consensus disorder prediction 1 22 - -
Amo19g3589 733 Pfam Pyridoxal-dependent decarboxylase conserved domain 97 349 IPR002129 GO:0016830|GO:0019752|GO:0030170
Amo19g3589 733 SUPERFAMILY PLP-dependent transferases 447 695 IPR015424 -
Amo19g3589 733 Gene3D - 76 319 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3589 Amo-Chr19 150641273 150659362 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3589 202 455 Calmodulin-binding Proteins AT1G65960 25.725 1.60e-07 52.4