Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3583 ATGGCATCTAGTCATAGTAATAATAATCATAATAGTTCACCCGTTAATAACAAAACTAAATTTGTAGTGAGTGACCTTGAGCAACAACAATTATCAAGAGACCCAGAAAATGAAGAAGAAGCAAATAAGAAGGAGGAATTTGATTACTCAAAAAGATCCCAGTGGTTGCGTGCAGCAGTGCTGGGAGCGAACGACGGGTTGGTGTCGACGGCGGCTCTGATGATGGGAGTGGGAGCAGTGAGGGAAGACATGAAGGCCATGGTGTTGTCGGGTTTCGCAGGCCTTGTGGCAGGGGCATGTAGCATGGCCATTGGTGAGTTTGTTTCTGTGTATTCACAGTTAGACATAGAGATTGCTCAAATGAAGAGACGACAACAACAAGAAGATGAGAAAGAGAAAAAGGGTTTACCGAACCCTTTGCAAGCAGCGGCAGCATCAGCTTTTGCGTTCTCGGTTGGTGCAATGGTTCCTCTTCTTGCGGCATCTTTTGTAAGGGACTATAAGCTCAGGTTGGGACTTATTTTGGGGTCAGTTAGTTTTGCTTTGATTTTGTTTGGTTGCTTGGCTGCCACTCTTGGTAAGGCTCCTCCATTTAGATCTTGTGTTAGGGTCTTCCTTGGTGGTTGGTTAGCCATGGCTATAACTTTTGGCCTAACCAAGTTGATTGGTTCAAGTGTCTTTTAG 684 0.4474 MASSHSNNNHNSSPVNNKTKFVVSDLEQQQLSRDPENEEEANKKEEFDYSKRSQWLRAAVLGANDGLVSTAALMMGVGAVREDMKAMVLSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQMKRRQQQEDEKEKKGLPNPLQAAAASAFAFSVGAMVPLLAASFVRDYKLRLGLILGSVSFALILFGCLAATLGKAPPFRSCVRVFLGGWLAMAITFGLTKLIGSSVF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3583 227 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 224 IPR008217 GO:0005384|GO:0030026
Amo19g3583 227 MobiDBLite consensus disorder prediction 1 30 - -
Amo19g3583 227 Pfam VIT family 129 219 IPR008217 GO:0005384|GO:0030026
Amo19g3583 227 Pfam VIT family 56 132 IPR008217 GO:0005384|GO:0030026
Amo19g3583 227 MobiDBLite consensus disorder prediction 1 47 - -
Amo19g3583 227 MobiDBLite consensus disorder prediction 31 47 - -
Amo19g3583 227 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 15 224 - -
Amo19g3583 227 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3583 Amo-Chr19 150523028 150524293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3583 28 224 Nodulin-like Gene Family AT3G43660 65.990 2.54e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3583 K22736 - gmx:100814343 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3583 19 150523028 150524293 Amo19g3583 19 150523028 150524293 PCT