Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3582 ATGGGTAGGAAGAAGCCTACGGCACGCGACGACGATAACGTGCCTGCTGCGTCACAGGGAGGCGGCAAATCGAAGAAGAAGGTCGTTGTCGACGATAATGAGTATGACATCGGTGACCTCTCCGAGGAGCCGCAGCCTGTGGCACCACCAGCTGCCAAGAAGAAGGGCAAAAAGGATAATGCCAAAGCTAAGGCAAAGGGTAAGGACGACGAAGAAGATGACGATGATGTGGCAATTAGTGCGGCTGGGGACGATGATGAGGATGAGGATGCTGGGATTGTGTTTGCTGGGAAGAAGAAGAAGGGTAAATCTAAGAAAGGTGGTGGAGGCAGTGTGTTCGCTGCTGCATCTGGTTTTGGCTTGCTTGGTGATGATGACGGTGATGGTGGTGATGATGAAGACGATGACAAATCTGGGATAACTGGTGAGGGTGGTGACGCTGAGGAGGAGGAGGACGAGGAGGCTGTGGTTAGTTTTACAGGGAAGAAGAAGCCTTCTAAGGGCTCGAAAAAAGGTGGTGGCAGTGTGTTCAGTGCCTCAGCTTTTGATGCTATTGATGATGGTGATAATGATGGTGGGGAGGAGGATGAGCTGGTGGTTAGTTTTTCGGGTAAGAAGAAGCCATCGAAGGGATCGAAGAAAGGCAGTTCATTCTCTGCCTCGGCCTTTGATGATGGTGAGGAGGTGGTGGATAGTGGTGGAGGTGAGGATGAACCAGCTATTGCTTTTACTGGGAAGAAGAAGTCTTCTAAAGGTGGCAGGAAGGGTGGTGTTGCTGCATTTTCAGCAGCTAGTTTTGGTGATATTGATGATGGGGAGGAGGCTAAGAATGAAAAGGAGGAAGATGACGATGGTGAGGACATGCCAATTACCTTCTCTGGTAAGAAAAAGAAGTCATCAAAGTCTACGAAGAAGGCTTCATTTAGTTCAGCTTTTGCCGATGAAGAAGATGATTCTGTAGCTGAGCCTACTAGAGATGGTGAGGATGAAGATGATGTTTTGGTTGCGTTTTCGGGTAAGAAGAAGTCTTCTAAAAAGAAAACTATTGCCAAACCATGTGATGAAACTGTTGAGCCTGAGCAACCTAGTGTTGGAGTTAGTAGTGCAGATGTTGACAACAATGTAAATAAGAGTGGAGTCACTGAAACCTCCAAAAATAAGAAGAAGAAGAAAAACAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTAGATGCGATTCTCGCGGAGCTTGGTGAGGGCCCTCCAACAGCTAAACCTTCTGCTCCTCAATCCCAGGATGATAAAGTTCAGCAGGATGATAAGGCTCAGCCTGCTTCGGAATCAGGACCTGCTACTGATGCTGCGGGTGAAAAGGAGGGGGAAGAGGAGACAGTAGAATCAGCTGCTGCAAAGAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCGGCAGCAGCAGCAGCAGCTGCAGCTGCTGGAACTGCAGCAGAAAATGAAGCTAAAGAAGTTAAGGCCGAGCCTGCTGAAGCTAAGAAGAATGATTCAAAGGCCAAAGCAGTCGACAACAAGAAAATACCCAAGCATGTTAGGGAGATGCAAGAGGCATTAGCTCGAAGGAAGGAGGCTGAAGAAAGGCAGAAGAAAGAATTGGAGGAGAGGTTAAGGAAGGAAGAAGAGGAGCGACGTAGGCAGGAGGAACTTGAGAGACAGGCTGAAGAAGCTAGACGCAGGAAGAAGGAGAAAGAAAAGGAGAAGCTCCAGAGAAAGAAGCAAGAAGGTAAACTGCTAACTGGTAAGCAGAAAGAGGAGGCTCGCCGCTTGGAGTTAATGAGGAAGCAGTTTCTTAATAGCACAGGAGGTGTGACTGTCCCTGGTGGGGACTCTGGTGCACCAGCCAAAAGGCCTATATATCAGACAAAGAAGTCGAAACCAACCCATCATCAGCAGAATGGTGCTGCTGCCCCTGCCACCGCTGCCGTTGAGACGGCTGAAAGTCTTGAAGCAAAGGAAGAGACAGTCACTGATGCAGGTTCAGACGAACCAGAAAAGGTTGAAGAAACCGTGGTAGAGCAGGTGGAGGAGAAAGTTGAACCTCTGGAAGCTGCTGAAGACAATGGAGTAGATGATGATGAAGAAGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATGCCAAGGGTGCATTTGCTGATGAAGATTCTGAGCTTGTACCAGTTGCCAAAAAGGAGACAAAGACTGCTGTAACTATGAACAATGCTGCTGCAACAAAGAAAACAATTTCTAAGCCTGTGACCGAAGAAATTATAGATAGAAAGCTTGTTGCTGACAAGAATAACTCAGAACCACCAAAATCTGTTTTGCCAAGGGAACCTATTACTCAGTCAAAAGAAATGCAAAAGTCCTCTGTGTCTCCTAAGCCGAGTGGAGAGAACCTCCGTTCTCCAATTTGCTGTATCATGGGGCATGTGGATACTGGTAAAACTAAGCTGCTGGATTGCATTCGAGGTACTAATGTTCAAGAGGGTGAGGCCGGTGGTATCACACAGCAGATTGGTGCAACATACTTCCCTGCGGACAACATACGTGAAAGAACTAAGGAATTGAAAGCTGATGCAAAACTAAAAGTTCCTGGTCTACTGGTTATTGATACGCCAGGGCACGAATCATTTACCAACTTAAGGTCTCGGGGTTCAGGGCTATGTGATATTGCAATTTTGGTTGTAGACATTATGCATGGCTTAGAGCAACAGACAATTGAATCACTCAATCTATTAAAAATGAGGAATACAGAATTCATTGTGGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGTCGCAATGCTCCAATTATCAAAGCGATGAAACAACAAACCAAGGATGTTCAAAATGAGTTCAATCACAGGCTCGTCCAGATTATTACTCAATTGAAGGAACAGGGACTAAATACCGAGTTGTATTATAAAAACAAGGAAATGGGAGAAACATTCAACATTGTACCTACAAGTGCAATAAGTGGTGAAGGAATCCCTGATTTGTTGTTACTGTTGGTTCAATGGACCCAAAAAACAATGGCTGAGAAACTTACTTATAGTGATGAAGTGCAGTGCACTGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGACCAAATAGTTGTCTGTGGAATGCAGGGGCCAATTGTAACAACAATTCGAGCTTTACTCACACCGCATCCAATGAAGGAACTCCGTGTTAAGGGTACATTTCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGAACTGGTTTATATGTTGTGAAGCCTGATGATGATTTGGACGATATTAAAGAATCTGCAATGGAAGACATGCGATCAGTCATGAGCAGGATTGACAGGAGTGGTGAGGGAGTTTGTGTACAGGCATCTACCCTTGGTTCTTTGGAAGCATTGCTGGAGTTTTTAAAAACACCAGAAGTGAATATTCCCGTTAGTGGTATAAGCATTGGCCCTGTGCATAAAAAGGATGTTATGAAGGCAAGCGTAATGCTTGAAAAGAAACGAGAATATGCCGCTATATTGGCATTTGATGTCAAAGTCACTCCCGAGGCTAGGGACCTTGCAGAAGAACTGGGTGTGAAAATTTTTATCGCTGATATCATTTATCATTTGTTTGATCAATTTAAGGCCTATATCGATAACATTAAGGAGGAGAAAAAGAAGGAATCTGCCGATGAGGCAGTCTTCCCATGTGTTCTGAAAATTTTACCAAACTGTGTTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATGTTCTTGAAGGCATTGCAAGGATTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGATATTGGCCGCATTGCCTCCATTGAAAATAACCACAAGCCAGTTGATTATGCAAAGAAGGGGCTCAAAGTAGCTATTAAGATTGTTGGTAGCAATCCTGAGGAGCAACAGAAAATGTTTGGGAGGCATTTTGAGATAGATGACGAACTTGTAAGCCATATTTCGCGGAGGTCTATCGACATACTCAAAGCTAATTATCGGGATGATCTAAGCACTGAAGAATGGAGGCTTGTTGTGAAATTAAAGAATGTTTTCAAGATTCAATGA 4212 0.4449 MGRKKPTARDDDNVPAASQGGGKSKKKVVVDDNEYDIGDLSEEPQPVAPPAAKKKGKKDNAKAKAKGKDDEEDDDDVAISAAGDDDEDEDAGIVFAGKKKKGKSKKGGGGSVFAAASGFGLLGDDDGDGGDDEDDDKSGITGEGGDAEEEEDEEAVVSFTGKKKPSKGSKKGGGSVFSASAFDAIDDGDNDGGEEDELVVSFSGKKKPSKGSKKGSSFSASAFDDGEEVVDSGGGEDEPAIAFTGKKKSSKGGRKGGVAAFSAASFGDIDDGEEAKNEKEEDDDGEDMPITFSGKKKKSSKSTKKASFSSAFADEEDDSVAEPTRDGEDEDDVLVAFSGKKKSSKKKTIAKPCDETVEPEQPSVGVSSADVDNNVNKSGVTETSKNKKKKKNKSGRTAQEEEDLDAILAELGEGPPTAKPSAPQSQDDKVQQDDKAQPASESGPATDAAGEKEGEEETVESAAAKKKKKKKEKEKEKKAAAAAAAAAAGTAAENEAKEVKAEPAEAKKNDSKAKAVDNKKIPKHVREMQEALARRKEAEERQKKELEERLRKEEEERRRQEELERQAEEARRRKKEKEKEKLQRKKQEGKLLTGKQKEEARRLELMRKQFLNSTGGVTVPGGDSGAPAKRPIYQTKKSKPTHHQQNGAAAPATAAVETAESLEAKEETVTDAGSDEPEKVEETVVEQVEEKVEPLEAAEDNGVDDDEEEDEWDAKSWDDVNLNAKGAFADEDSELVPVAKKETKTAVTMNNAAATKKTISKPVTEEIIDRKLVADKNNSEPPKSVLPREPITQSKEMQKSSVSPKPSGENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPADNIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIIKAMKQQTKDVQNEFNHRLVQIITQLKEQGLNTELYYKNKEMGETFNIVPTSAISGEGIPDLLLLLVQWTQKTMAEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTFLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLDDIKESAMEDMRSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYAAILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDVLEGIARIGTPICIPSRDFIDIGRIASIENNHKPVDYAKKGLKVAIKIVGSNPEEQQKMFGRHFEIDDELVSHISRRSIDILKANYRDDLSTEEWRLVVKLKNVFKIQ* 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3582 1403 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1403 - -
Amo19g3582 1403 Pfam Elongation factor Tu GTP binding domain 815 1023 IPR000795 GO:0003924|GO:0005525
Amo19g3582 1403 CDD IF2_eIF5B 814 1024 - -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 699 715 - -
Amo19g3582 1403 Pfam Elongation factor Tu domain 2 1050 1125 IPR004161 GO:0005525
Amo19g3582 1403 Pfam Translation-initiation factor 2 1140 1252 IPR023115 -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 361 381 - -
Amo19g3582 1403 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1403 IPR015760 -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 660 698 - -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 72 91 - -
Amo19g3582 1403 Gene3D - 806 1033 IPR027417 -
Amo19g3582 1403 Coils Coil 521 592 - -
Amo19g3582 1403 SUPERFAMILY Translation proteins 1270 1402 IPR009000 -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 791 808 - -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 448 467 - -
Amo19g3582 1403 PRINTS GTP-binding elongation factor signature 815 828 IPR000795 GO:0003924|GO:0005525
Amo19g3582 1403 PRINTS GTP-binding elongation factor signature 931 940 IPR000795 GO:0003924|GO:0005525
Amo19g3582 1403 PRINTS GTP-binding elongation factor signature 879 889 IPR000795 GO:0003924|GO:0005525
Amo19g3582 1403 PRINTS GTP-binding elongation factor signature 895 906 IPR000795 GO:0003924|GO:0005525
Amo19g3582 1403 MobiDBLite consensus disorder prediction 1 719 - -
Amo19g3582 1403 Gene3D Translation factors 1266 1403 - -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 315 329 - -
Amo19g3582 1403 CDD aeIF5B_II 1035 1145 - -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 495 606 - -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 52 71 - -
Amo19g3582 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 812 1102 IPR027417 -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 125 155 - -
Amo19g3582 1403 CDD IF2_aeIF5B_IV 1274 1369 - -
Amo19g3582 1403 Gene3D - 1155 1259 IPR036925 -
Amo19g3582 1403 Coils Coil 452 484 - -
Amo19g3582 1403 MobiDBLite consensus disorder prediction 770 809 - -
Amo19g3582 1403 Gene3D Translation factors 1034 1154 - -
Amo19g3582 1403 TIGRFAM small_GTP: small GTP-binding protein domain 816 969 IPR005225 GO:0005525
Amo19g3582 1403 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 811 1027 IPR000795 GO:0003924|GO:0005525
Amo19g3582 1403 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1136 1265 IPR036925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3582 Amo-Chr19 150514374 150522017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3582 233 1403 Eukaryotic Initiation Factors Gene Family AT1G76810 64.899 0.0 1207