Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3554 ATGAGCTCCAAAGATCCCCACACTGATTCACTTGATGCATTGAAGTTTAAAATGTCTGCTCGAAAGGATTCAGATAAGTTCTTCATGTCCATCAGCAAAAGAAAAAAAAAGCCATTTGATGTTTTACGTGCTATGTACGATGGTTGCATTGCTGGAGGTGTTGCCGGAGTCGTTGTAGAAACAGCTTTGTACCCCATTGATACCATCAAAACTCGATTGCAGGTTGCTCGTGGTGGAGGGCAAATTATCTTGAAAGGTCTATATTCAGGGTTGGCTGGAAATCTTGCTGGTGTCTTACCAGCATCTGCGATTTTTGTTGGTGTGTATGAACCCACAAAGCAAAAATTGCTACGGTCCTTTCCTGAGAATCTCAGTGCCATAGCTCATTTTGCTGCAGGTGCTATTGCAGGAGCTGCATCTTCTCTTGTTCGTGTTCCAACTGAGGTTATTAAGCAAAGGATGCAAATGGGTCAATTTAAATCAGCACCAGCTGCTGTGCGTCTTATCGTTGCCAATGAAGGTTTTAAAGGTCTTTATGCGGGATATGGGTCTTTCTTATTGCGAGATCTACCATTCGATGCCATACAATTCTGTATCTATGAGCAGCTCCGGATCGGTTATAAGCTAGCAGCAAAAAGAGACCTAAAGGATCCAGAAAATGCTATGCTCGGGGCGTTTGCTGGTGCCATAACTGGAGCAGTAACAACACCTCTTGATGTAGTAAAAACAAGACTAATGGTTCAGGGATCACAAAACCATTACAAAGGCATTTATGATTGTGTCAACACAATAGTTAAAGAAGAAGGAACTCATGCTCTTTTTAAGGGTATGGGGCCAAGAGTGTTGTGGATAGGAATTGGTGGTTCAATATTTTTTGGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAGAGGCATCCAAAAGCTTAG 930 0.4215 MSSKDPHTDSLDALKFKMSARKDSDKFFMSISKRKKKPFDVLRAMYDGCIAGGVAGVVVETALYPIDTIKTRLQVARGGGQIILKGLYSGLAGNLAGVLPASAIFVGVYEPTKQKLLRSFPENLSAIAHFAAGAIAGAASSLVRVPTEVIKQRMQMGQFKSAPAAVRLIVANEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLKDPENAMLGAFAGAITGAVTTPLDVVKTRLMVQGSQNHYKGIYDCVNTIVKEEGTHALFKGMGPRVLWIGIGGSIFFGVLEKTKQILAQRHPKA* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3554 309 Pfam Mitochondrial carrier protein 47 118 IPR018108 -
Amo19g3554 309 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Amo19g3554 309 Pfam Mitochondrial carrier protein 219 304 IPR018108 -
Amo19g3554 309 SUPERFAMILY Mitochondrial carrier 49 296 IPR023395 -
Amo19g3554 309 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 3 307 - -
Amo19g3554 309 Gene3D Mitochondrial carrier domain 46 309 IPR023395 -
Amo19g3554 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 115 IPR018108 -
Amo19g3554 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Amo19g3554 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
Amo19g3554 309 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 3 307 - -
Amo19g3554 309 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Amo19g3554 309 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Amo19g3554 309 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085
Amo19g3554 309 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3554 Amo-Chr19 149704165 149707639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3554 132 307 Chloroplast and Mitochondria Gene Families AT1G07030 32.240 3.75e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3554 K15111 - gmx:100800051 474.167