Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3545 ATGGGGTGTGTTCAGGGCAAGACACTTGAAGGTGCTGCTCATGAACCCAAGGGACTAGACAGGCTCAAATTGGAAAATGGGTATGTGTCAAATTCTGATTTTGTTGCTCACAGAAGATCCACTGGTCAAAAGTATGAACCTATGCAGGATGCTAATGGTAGGCATCATCATCATCAGAAGAGAGAACAACCTCAACCCAGAAACCTTGCAAGAGTTAATGAGCTTGCTTCTGTTCCTGGCGGCAACAATGGTGAAAGTGGCAAGGGGAAAGGGGGTGTTACTAGAGAGAGGAAGAAGAGAGAATTGGCAAAGAAGAAGACTTTTGAGGATGACTATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAATGTTCCTCCTCAAGTCTTTGGTGGATTGGTCCCAAGGAGTGCTGAATCCTACAAAATGATTGATAAGGTAGGACAAGGAACATACAGCAATGTGTATAAAGCTCTAGATCGGGACACCGGAGAAATTGTTGCTCTAAAAAAGGTCCGCTTCAATACATCAGAGCCCGAAAGCATTAAATTTATGGCAAGAGAAATCTTGATAATACAAAGATTGGATCATCCCAATGTGCTAAAACTTAAAGGATTAGCCACTTCAAGAATGCAATACAGTATATATCTAGTTTTTGACTTCATGCAAACGGATTTGACAAGAATTATCTCTCATTCTGAAGAGAGGCTAACCGAGCCGCAGGTCAAGTGCTATATGCAGCAATTGCTTTCTGGTCTGCAGCATTGCCATGAGAGGGGAATTTTACATCGAGATATAAAGGGATCAAACCTTTTGATTGATAGTAATGGAATGCTTAAGATTGCAGATTTTGGGCTAGCCAACTATTATAGTCCAAACCATGAGCATCCTCTCACAAGCCGGGTCGTGACACTGTGGTATAGAGCCCCTGAGTTGCTGTTAGGTGCCACGGATTATGGAGTTGGTATTGATCTATGGAGTGCTGGATGCCTCCTTGCAGAAATGTTCACCGGAATTCCACTCATGCCTGGCCGAACAGAGGTTGAGCAACTTCATAGAATTTTCAGATTATGTGGCACACCATCAGAGGAGTACTGGAAAAAATTTAAAATATCTGCATCATTTAGACCTCCAAGGTCGTATCGACCTAGCTTTCTAGAAACTTTCAGGGATCTCCCTCCATCTTCTTTGGGGCTTTTATGTACCCTCCTTGCTTTGGAACCGGCATTCCGTGGAACTGCATCTAAAGCTCTTAACAATCCGTTTTTCTTTACAAGCCCGTTGGCCTGTGATCTCTCTGGTTTGCCTGTAATCCACAGAGAAGAAGATGAACATGATCAAGCCAAAGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGTACATACCTGGAGCGTCGCAAGAGTCTAGCTCCCAAGAGGCAGATAGAACATACTGTGTCTAACAAGGAGGATTCAAGAAGGAATGTGGAACCTGAAACTTACATTCCAAGCGAAGAACCGGGTAGCGCAACCATAAGCAGTACCTCATCTAGTGTAAACCCTGGTGTGGCTAAGGAGCAGTTTCCACTTTTGGTTTCAGATAAAAAGGTGGCCCCAAAATACCATCACCATGGCAGTGTTGGTGAAATTACAAGGTACCTTCCTCCATTACCCAAGTCAAAACCAAAAGCAACCCAGAATGATGACTACAACAGATTCAGTTTCAGGAGTGCTTCTACCAGAGAATTTAGAAACTTTAAGAGGGAGGACTATTTACTCTTTGAAATTGATTAG 1785 0.4314 MGCVQGKTLEGAAHEPKGLDRLKLENGYVSNSDFVAHRRSTGQKYEPMQDANGRHHHHQKREQPQPRNLARVNELASVPGGNNGESGKGKGGVTRERKKRELAKKKTFEDDYEMVDGWPKWLVDNVPPQVFGGLVPRSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREILIIQRLDHPNVLKLKGLATSRMQYSIYLVFDFMQTDLTRIISHSEERLTEPQVKCYMQQLLSGLQHCHERGILHRDIKGSNLLIDSNGMLKIADFGLANYYSPNHEHPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFTGIPLMPGRTEVEQLHRIFRLCGTPSEEYWKKFKISASFRPPRSYRPSFLETFRDLPPSSLGLLCTLLALEPAFRGTASKALNNPFFFTSPLACDLSGLPVIHREEDEHDQAKEQIKYMNSKIRRSRTYLERRKSLAPKRQIEHTVSNKEDSRRNVEPETYIPSEEPGSATISSTSSSVNPGVAKEQFPLLVSDKKVAPKYHHHGSVGEITRYLPPLPKSKPKATQNDDYNRFSFRSASTREFRNFKREDYLLFEID* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3545 594 MobiDBLite consensus disorder prediction 471 497 - -
Amo19g3545 594 MobiDBLite consensus disorder prediction 471 518 - -
Amo19g3545 594 PANTHER CYCLIN-DEPENDENT KINASE 1 541 - -
Amo19g3545 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Amo19g3545 594 Gene3D Transferase(Phosphotransferase) domain 1 225 485 - -
Amo19g3545 594 MobiDBLite consensus disorder prediction 34 100 - -
Amo19g3545 594 ProSitePatterns Protein kinases ATP-binding region signature. 148 171 IPR017441 GO:0005524
Amo19g3545 594 Coils Coil 439 459 - -
Amo19g3545 594 PANTHER CELL DIVISION PROTEIN KINASE 1 541 - -
Amo19g3545 594 Gene3D Phosphorylase Kinase; domain 1 133 224 - -
Amo19g3545 594 MobiDBLite consensus disorder prediction 503 518 - -
Amo19g3545 594 SUPERFAMILY Protein kinase-like (PK-like) 137 428 IPR011009 -
Amo19g3545 594 ProSiteProfiles Protein kinase domain profile. 142 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3545 594 MobiDBLite consensus disorder prediction 547 566 - -
Amo19g3545 594 Pfam Protein kinase domain 142 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3545 594 SMART serkin_6 142 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3545 594 MobiDBLite consensus disorder prediction 39 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3545 Amo-Chr19 149613064 149616493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3545 127 459 Core Cell Cycle Gene Families AT5G10270 44.444 7.19e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Amo19g3545 Pkinase 1.1e-66 CL0016