Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3535 ATGGCGTCGTCGAAGCTGATGCCGACCACAAATTCTAGAAACCCCGATCCTCCACTACCTCTCCAACGACAACCATCCTCTTCCCCAAAACCCCAACAATTCACTACCACCAACTTCATCCCAATGCCCGAAGATGCCACCCTCCTTGATGCTCAAATTTCCCTCTTCGAAGCCCCTTCCCCCGCCCCTGCCTCAGCCAAAACCGTCGACGACTTGTGGCGGGAGATCGTCGCCGGAGAACGGCGCGAGTGCAAGGAGGAAGCTACCGAAGAGATGATGACGCTCGAGGACTTCCTTGCCAAGGCTGGCGCCGTTGACGACGTCACCGACGTTGTCCCCATCGACGAGGAGGTGAAGATGCCGATGGCGCTGACGGATAGGCTGGGCAGCGGTGGCGGCATGTTCGCGTTTGATCCACTGCCGACGACGCCGTTTCAAGGGATGGAGAACATGGAAGGGTCGGTGATAGGGTTCGGGAATGGGGTGGAAGTGGTTGAAGGTGGCGTTGGCGGAGGAGGGGGAGGAGGGAGAGGGAAGAGGGGGCGCCCCGTTTTGGAGCAGCAGCTCGATAAGGCTGCTCAGCAGAGGCAGCGGAGAATGATCAAGAACAGAGAATCTGCTGCTAGGTCTAGAGAACGAAAGCAAGCTTATCAAGTTGAGCTGGAATCATTGGCGGTGAAGCTAGAGGAGGAAAATGACAAGCTAATGAAGGAAAAGGCCGAGAAGAAAAAGGAAAGGTACAAACAGCTTATGGAAAAAGTAATTCCTGTTGTGGAGAAGCGAAGGCCACCACGATTTCTACGTCGTGTTCGCTCCTTGCAATGGTAG 828 0.5543 MASSKLMPTTNSRNPDPPLPLQRQPSSSPKPQQFTTTNFIPMPEDATLLDAQISLFEAPSPAPASAKTVDDLWREIVAGERRECKEEATEEMMTLEDFLAKAGAVDDVTDVVPIDEEVKMPMALTDRLGSGGGMFAFDPLPTTPFQGMENMEGSVIGFGNGVEVVEGGVGGGGGGGRGKRGRPVLEQQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLMKEKAEKKKERYKQLMEKVIPVVEKRRPPRFLRRVRSLQW* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3535 275 Gene3D - 193 245 - -
Amo19g3535 275 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 42 274 - -
Amo19g3535 275 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 42 274 IPR043452 GO:0003700|GO:0045893
Amo19g3535 275 SUPERFAMILY Leucine zipper domain 195 246 IPR046347 GO:0003700|GO:0006355
Amo19g3535 275 Coils Coil 214 253 - -
Amo19g3535 275 MobiDBLite consensus disorder prediction 1 38 - -
Amo19g3535 275 CDD bZIP_plant_BZIP46 195 233 - -
Amo19g3535 275 SMART brlzneu 191 255 IPR004827 GO:0003700|GO:0006355
Amo19g3535 275 Pfam bZIP transcription factor 193 252 IPR004827 GO:0003700|GO:0006355
Amo19g3535 275 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 198 213 IPR004827 GO:0003700|GO:0006355
Amo19g3535 275 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 245 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3535 41 275 bZIP Transcription Factor Family AT5G44080 52.692 6.55e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo19g3535 bZIP_1 1.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3535 K14432 - tcc:18592635 244.973