Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3510 ATGGGTGCTGAAGCTGGTGCAACTGAGTGTTTCAGTAAGGCCATGGCGTCGATGCCTGGGTTTCGGTTTCATCCCACGGATGAGGAGCTGGTTATGTACTATCTGAAGAGGAAGATATGTGGGAAGAAGCTGAAACTCGACGTGATTCTAGAAACCGATGTTTACAAGTGGGATCCTGAGGAATTGCCAGAGATATCTGTACTGAGGACTGGAGATAGGCAATGGTTCTTTTTCACTCATAGAGATAGGAAGTATCCTAATGGTGCGAGGTCCAACCGAGCAACAAGGCAAGGTTACTGGAAAGCAACAGGAAAGGATCGTAATGTGACCTGCAATTCTCGGTCAGTTGGAGTGAAAAAGACTCTGGTTTTCTATAGAGGCAGAGCTCCTAATGGTGAGCGGACCGATTGGGTTATGCATGAATACACCATGGATGAAGAAGAGCTGAATAGGTGCCAAGATATTAAGGACTATTTTGCACTTTACAAGCTATACAAGAAAAGTGGACCTGGTCCTAAAAATGGAGAACAGTATGGTGCACCATTTAAAGAAGAGGAGTGGGCTGATGACGAATGTGTAGATTTCAATATTAACTCAGCAGATCGGGAGGTAGTAAATACTGTCCCTGTTAATGATCAGCTGCCTCCTTTGGCCGATGATGAAGTCACGGATATGATTAATCAAATTTTGGATAATGAGCTTGCCCTTGACCAGCAATTTGGTGACGGCCTTGAATTTCCTCAGGTTGTTGCTGAAGAAACACAAAGTACTGTGGTGGATCAGTTCTCTGAGGCAGTGACGGACCCCGAGTACAACGATATTTACCACTCAACCAGTCAGCACTATGATGTGCAGAATGTCAACTTCAATCAGTCGGTTGCATCTCACCTTCATGCCCCGGAGGGATCAGAAGTTATTTCTACTGCCAACATTCAAGTAGAAGACTATAACTTTCAGGAGGATGACTTCTTGGAAATCAACGATCTCAATGGTAGTGAACTTACAATTCCAAATATGGAAACACCAGTGGAGAACCTGCAGTTTGAAGATGGATTGTGTGAACTTGATCTGTTCCAAGATGCAGAGATGTTTCTTCGTGACTTGGGACCAATCAATGAGGAAACCATTCCACATTCATATATGAATAATGCCGCTGGAAGCAACATTGAAAATCAGAATTATCACTTGCTGCCCAATCCAGAGGACGCTACTCAAAATGTTCATGAATTTTGGATGCATGATGAAAGAAACACCTCGAGTCTGTTTGAAGGCTTTGATGATTCTCTCTCTCAACAAAATCCAGGTGCTGTATCTACTGAAGGCTATGATAATCAAAGTAGCATTGCAGAAGATGTTGCTACAAGTAGATTCTCTTCGGCTCTCTGGTCCTTTGTTGAGTCAATACCTACCACTCCTGCATCAGCTGCGGAAAATGCTCTAGTGAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCCGAGTGAAGATTAATATCAAGCCGACGAACACAGCTGCAGGTAAAGACACTGCAACTACGAAGAGAGTGGGCAGAAAAGGATTTTCATTCCTTTTCTTCCCAATTATTATTGCTTTATGTGCTTTCTTATGGGTTTCTCTTGGAACTTTTAGATTATTAGGGAGATGCATCGCTCCTTGA 1656 0.4324 MGAEAGATECFSKAMASMPGFRFHPTDEELVMYYLKRKICGKKLKLDVILETDVYKWDPEELPEISVLRTGDRQWFFFTHRDRKYPNGARSNRATRQGYWKATGKDRNVTCNSRSVGVKKTLVFYRGRAPNGERTDWVMHEYTMDEEELNRCQDIKDYFALYKLYKKSGPGPKNGEQYGAPFKEEEWADDECVDFNINSADREVVNTVPVNDQLPPLADDEVTDMINQILDNELALDQQFGDGLEFPQVVAEETQSTVVDQFSEAVTDPEYNDIYHSTSQHYDVQNVNFNQSVASHLHAPEGSEVISTANIQVEDYNFQEDDFLEINDLNGSELTIPNMETPVENLQFEDGLCELDLFQDAEMFLRDLGPINEETIPHSYMNNAAGSNIENQNYHLLPNPEDATQNVHEFWMHDERNTSSLFEGFDDSLSQQNPGAVSTEGYDNQSSIAEDVATSRFSSALWSFVESIPTTPASAAENALVNRALNRMSSFSRVKINIKPTNTAAGKDTATTKRVGRKGFSFLFFPIIIALCAFLWVSLGTFRLLGRCIAP* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3510 551 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 549 - -
Amo19g3510 551 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
Amo19g3510 551 Gene3D NAC domain 26 169 IPR036093 GO:0003677|GO:0006355
Amo19g3510 551 SUPERFAMILY NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Amo19g3510 551 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Amo19g3510 551 PANTHER NAC TRANSCRIPTION FACTORS 2 17 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3510 Amo-Chr19 149007929 149012140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3510 3 549 NAC Transcription Factor Family AT1G34190 40.962 8.20e-130 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo19g3510 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3510 - - gmx:100794925 785.408