Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3495 ATGGTGCTACTGCAGAGAAACATGAAACTCCGAAAACAACCGCCTTTGTCACTGTCCCTTGTCACCTTCATATCTATCACTATCTTCACCACTGCCACCACCATCATCTCACCGGGAACAACTCTCTATGCTTCAAACACCAACCAATCGTGGCCTTCTCCCAACAACACCTTTTCCCTACGCTTCTACCCTCTCCAAACCACCCCATCTTCCTTCATCGCCGCCGTCGTACACTCCGGCGGCGCTCCCATTATCTGGTCCGCCGGAAATTCTGCGGCCGTGGACTTCGGTGGCTACCTCCGCCTCCTTCCAGCTGGAAACCTTCGCTTGGTTAATGGCTCCGGCGCTACCTTGTGGGACTCCAACACCAGCAACATAGGTGTCACCTCAGCAACGGTTCTTGAAAGTGGAAACTTTGTTCTCTCCAATGGAACTTCCACTGTTTGGTCAAGCTTTGAGAACCCCACTGATACAATTGTCCCTTCTCAAAGTTTCAATCTTGGTATGGTTCTGAGATCTGGGGTTTACTCATTCTTTCTTCAGAAATCTGGGAATCTTACTCTTAGTTGGAATAATAGTGTTACTTATTGGGATCAAGGCTTGAACTTTTCAATGAGTGGTGTGAATTTGAGTTCACCTGTATTAGGATTGAAGTCTGAGGGGATTTTGGAGATAAGTGACCCTAATTTGACTTCTCCTGTGGTTGTTGCCTATAGTAGTGACTATAATGAAGGAGGGAACAATGTGTTGAGGGTTTTAAAGCTTGGTGATGATGGGAATTTGAGGGTTTATAGTTATTTGAAGGGTAGTGAAGTTGTGAATGTGAATTGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTACTGTGGGAACTATGGTGTGTGTAGTTATGATTCAAAATCAGAACCTCTTTGTGGCTGTCCATCTCACAATTTTGAGATGGTTGATCCTAATGATGGTAGGAAAGGGTGCCAGAGGAAGGTGAAGCTTGAGGACTGTGTTGGGAAGGTTGCTATGTTGCAATTGGATCATGCAAAATTCTTGACATACCCTCCTGTTTTTGTTGTTAATCCTGAGATATTTTTCATTGGTATTTCAGCTTGTAGTGGAAATTGTCTTGCTGCTAGTTCTTGTTTTGCTTCCACTTCCTTGGCGGATGGAACCGGATGGTGTTACATTAAGACGTCGAATTTCATCAGTGGATACCAGAATCCTGCGCTGCCTAGCACTTCCTTCATTAAGGTTTGTCCACCTGTAGCTCCAAACTCAACTCCCTCTTTGGAGAATGTTGTTAAGAAGCATGGGAGGATTCATGGTTGGATAGTAGCTTTAGTTTTGAGTAGCATTTTAGGTTTCCTTGCATTTGAGGGTGGTTTATGGTTGTGGTGTTTTAGGAATATCCCGAGATTCGGTGGATTCTCTGCTCATTATGCTCTGCTTGAGTATGCATCCGGCGCACCAATCCATTTCTCTTACAAGGAACTTCAAAGGTCAACCAAGGGCTTCAAGGAGAAGCTAGGTGATGGTGGATTTGGTGCTGTTTATAAAGGAACTCTTGCTAATAAATCTGTTGTTGCTGTGAAGCAACTTGAGGGAATTGAGCAAGGTGACAAACAGTTTAGGATGGAGGTTTCTACCATAAGTAGCACCCATCATTTGAATCTAGTGAGGTTGATTGGTTTCTGTTCGGAAGGGCGTCACCGGCTTTTGGTATACGAGTTCATGAAAAATGGATCACTTGATAATTTCCTCTTTGTTGATGATGAACTACAATCAGGGAAATTATTGGATTGGGATCAAAGATTCAACATCGCCCTTGGCGCCGCGAGAGGCCTGACATACCTTCATGAGGAGTGTAGAAACTGCATTGTTCATTGTGACATCAAGCCTGAAAACATTCTCTTAGACGAGAACTACAACGCAAAAGTCTCGGATTTTGGCCTTGCAAAGCTCTCGAGTGCCACGAATCACCGGCACAGAACATTGACTAGTGTGAGAGGAACAAGAGGGTACCTAGCTCCGGAATGGCTGGCAAACCTTCCAATTACTTCGAAATCAGATGTGTATAGTTATGGTATGGTTGTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAGTCTCAGAAGAAACAAACAGAAAGAAATGTTCTATATGGGCCTATGAGGAGTTTGAGAAAGGTAACATAAGAGGTGTGATTGACAAAAGATTGTTTTGTGAAGAAGTGAAGTTGGAGAAAGTAGAGAGATTGATTATGGCATGTTTTTGGTGCATTCAGGAGCAGCCATCAATGAGGCCAACAATGAGCAAGGTTGTTCAAATGCTAGAAGGTGTGGTAGATATTGAAAATCCACCACCACCAAAATCCATTACAATGGGATTTTCTAGTGCAATTAACACCAATGTTGCAGATTCATCAGCTTCAACATGA 2433 0.4357 MVLLQRNMKLRKQPPLSLSLVTFISITIFTTATTIISPGTTLYASNTNQSWPSPNNTFSLRFYPLQTTPSSFIAAVVHSGGAPIIWSAGNSAAVDFGGYLRLLPAGNLRLVNGSGATLWDSNTSNIGVTSATVLESGNFVLSNGTSTVWSSFENPTDTIVPSQSFNLGMVLRSGVYSFFLQKSGNLTLSWNNSVTYWDQGLNFSMSGVNLSSPVLGLKSEGILEISDPNLTSPVVVAYSSDYNEGGNNVLRVLKLGDDGNLRVYSYLKGSEVVNVNWVAVEDQCEVFGYCGNYGVCSYDSKSEPLCGCPSHNFEMVDPNDGRKGCQRKVKLEDCVGKVAMLQLDHAKFLTYPPVFVVNPEIFFIGISACSGNCLAASSCFASTSLADGTGWCYIKTSNFISGYQNPALPSTSFIKVCPPVAPNSTPSLENVVKKHGRIHGWIVALVLSSILGFLAFEGGLWLWCFRNIPRFGGFSAHYALLEYASGAPIHFSYKELQRSTKGFKEKLGDGGFGAVYKGTLANKSVVAVKQLEGIEQGDKQFRMEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFVDDELQSGKLLDWDQRFNIALGAARGLTYLHEECRNCIVHCDIKPENILLDENYNAKVSDFGLAKLSSATNHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVVLEIVSGRRNFEVSEETNRKKCSIWAYEEFEKGNIRGVIDKRLFCEEVKLEKVERLIMACFWCIQEQPSMRPTMSKVVQMLEGVVDIENPPPPKSITMGFSSAINTNVADSSAST* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3495 810 SMART serkin_6 501 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3495 810 ProSiteProfiles Protein kinase domain profile. 501 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3495 810 Gene3D Phosphorylase Kinase; domain 1 475 575 - -
Amo19g3495 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 200 IPR036426 -
Amo19g3495 810 Pfam Protein kinase domain 504 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3495 810 Gene3D - 154 275 IPR036426 -
Amo19g3495 810 Gene3D Transferase(Phosphotransferase) domain 1 576 785 - -
Amo19g3495 810 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Amo19g3495 810 Pfam D-mannose binding lectin 86 167 IPR001480 -
Amo19g3495 810 SUPERFAMILY Protein kinase-like (PK-like) 484 777 IPR011009 -
Amo19g3495 810 ProSiteProfiles Bulb-type lectin domain profile. 27 154 IPR001480 -
Amo19g3495 810 SMART blect_4 42 155 IPR001480 -
Amo19g3495 810 PANTHER OS07G0415500 PROTEIN 24 804 - -
Amo19g3495 810 CDD STKc_IRAK 507 778 - -
Amo19g3495 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Amo19g3495 810 Pfam S-locus glycoprotein domain 242 309 IPR000858 GO:0048544
Amo19g3495 810 ProSiteProfiles Bulb-type lectin domain profile. 156 276 IPR001480 -
Amo19g3495 810 PIRSF SRK 8 810 IPR024171 GO:0004674
Amo19g3495 810 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 24 804 - -
Amo19g3495 810 Gene3D - 28 153 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3495 Amo-Chr19 148766452 148768888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3495 477 786 Receptor kinase-like Gene Family AT5G20050 43.168 5.16e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo19g3495 Pkinase 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3495 - - gmx:100810753 1224.15