Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3490 ATGCCGGAATCGGAGACCGGGACGCCAACAGCGGCGCCTATGCCGGCGACGCCGGATACTCCGGGAGGGCCGCTGTTCACGTCGCTTCGAGTGGACTCGCTGACACACGAACCGTCGTTTACAATGGCGGGAAGGTGCGGCACGTGTTTGCCAGCTGCCATGAGTAAGAGCCATAGTTGCATCACTGATTTCACTGTTGGTGTTCCAATGCCAAATGTGTCTCTCGCTCAAAAGGTTGGAGCAGAGTTTGTTGGAACATTCATACTGATATTTGCAGCAACAGCAGGGCCCATTGTGAACAACAAGTACAACGGAGCAGAGACTCTAATGGGCAACGCAGCATGCGCCGGCCTCACCGTCATGTTCATAATCCTCTCCATTGGCCACATCTCCGGCGCCCACCTAAATCCATCCCTCACCATCGCCTTCGCCGCGTTTCGCCACTTCCCATGGACTCATGTCCCTGCCTACATTGCCGCACAAGTCTCTGCCTCCATTTGCGCCTGCTTTGCTCTCAAGGGCGTTTACCACCCTTACCTCTCCGGCGGCGTCACCGTGCCTTCTAACATCACTGTTGGCCAGGCCTTTGCCACTGAATTCATCATCACTTTCATTCTCATGTTTGTTGTAACTGCCGTTGCCACTGATACTCGTGCTGTTGGAGAGTTGGCTGGTATAGCTGTTGGTGCCACTGTTTTGCTCAACATTCTCATTTCAGGGCCAACAAGCGGCGGTTCGATGAATCCGGTTCGAACGTTGGGTCCAGCGGTAGCGGCAGGGAATTACAAACACATATGGCTGTACTTGGTGGCGCCAACACTGGGTGCCCTTGCAGGCGCCGGCGTTTATACGCTGGTTAAGCTGCAGGAAAGCGATGCTCAGCCGCCGCGACAGACTAGGAGCTTCCGTGACAGGGCAGGCTAG 924 0.5541 MPESETGTPTAAPMPATPDTPGGPLFTSLRVDSLTHEPSFTMAGRCGTCLPAAMSKSHSCITDFTVGVPMPNVSLAQKVGAEFVGTFILIFAATAGPIVNNKYNGAETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWTHVPAYIAAQVSASICACFALKGVYHPYLSGGVTVPSNITVGQAFATEFIITFILMFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWLYLVAPTLGALAGAGVYTLVKLQESDAQPPRQTRSFRDRAG* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3490 307 Pfam Major intrinsic protein 73 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo19g3490 307 Gene3D Glycerol uptake facilitator protein. 69 300 IPR023271 -
Amo19g3490 307 SUPERFAMILY Aquaporin-like 74 294 IPR023271 -
Amo19g3490 307 CDD MIP 77 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo19g3490 307 PANTHER AQUAPORIN NIP5-1-RELATED 12 301 - -
Amo19g3490 307 PANTHER AQUAPORIN NIP2-1 12 301 IPR034294 -
Amo19g3490 307 MobiDBLite consensus disorder prediction 1 23 - -
Amo19g3490 307 ProSitePatterns MIP family signature. 134 142 IPR022357 -
Amo19g3490 307 PRINTS Major intrinsic protein family signature 77 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo19g3490 307 PRINTS Major intrinsic protein family signature 116 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo19g3490 307 PRINTS Major intrinsic protein family signature 153 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo19g3490 307 PRINTS Major intrinsic protein family signature 198 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo19g3490 307 PRINTS Major intrinsic protein family signature 229 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo19g3490 307 PRINTS Major intrinsic protein family signature 266 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3490 Amo-Chr19 148692912 148704079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3490 25 303 Major Intrinsic Protein MIP AT4G10380 72.695 2.37e-141 399