Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3489 ATGATTTTTAAGACACTAGAAGAAGCTGCAAAGTTCTATAAACATTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCGGGATGGAGATAAAATTAAGAATCAACTAATCGTATGTACCAGAGAGGGGAGGTGGAAATCCAAGATATCTCTAACTCTGAAGACAAACCCCTCAGCTGGGTTAAAATGTCTAGCCAGGATTTATGTACACATAATGAAGGACGTCGGTCTTTGGACAATTTCCAAAATTGTTCTGAATCACTCACATCGTTGCTGTCCAGACCAGGCAGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTTGTGCGTCGCACTATTGAAACCCACGAGGAAACTGGAATCAGACCGAGCAAAACTTACCAATCATTTGTGGCAGCAACTGACAGCCACCGTGAACTAACTGTACGAGGATCGGCATATATGGATTTTAGTTTACTTGGATCACCACTTCTAAGCCGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTCAACAAGTTTCTAACTTGACATTCAACAAGTTTTTAGTCACCTACGATGTAGTATCAAGAGAGGTAAAGTGCCAGTGCTTGCTGTTTGAGTCAAGGGGCATATTATGCCGCCATTCCCTGAGCGTCCTAAGCTTTGAGCGAGTGGATAACATGGCACCGAAATACATACTGGAACGCTGGAGCAAGAACATAAAGAGGAGGCACACACACATCAAGAGCAGCCAAGATGAGCCTCTATTGGAGCCAAGAAGTAAGAGATTCGATGAATTGTTGTTTCGGTCGCACAATATATGCGAATTTGCATCCGAGTCCGAGGAGTTGACCGGAATTCTGCAGCGAGCGTTTGACAAGGTCATGGCGGAGATGCAAGAATATCAAGAGAGAAGCAAAGGAAAAAGTTTATTATCCCACGAAGAAGCGACATTGAGCGAGGTGAACGACCTTCAAAGCCCGCCACGCTTCAAAACAAGAGGCCTGTCCAAGAACAGACTTGGATCAAACCTGGAAAAAAGATATCAAATGCCACGAAGAAAAAGAAAAAGACAGCTCCAAGGGAGGTAA 1095 0.4384 MIFKTLEEAAKFYKHYSKLAGFSTKIRNTTRDGDKIKNQLIVCTREGRWKSKISLTLKTNPSAGLKCLARIYVHIMKDVGLWTISKIVLNHSHRCCPDQAEMLKQHRELSMFVRRTIETHEETGIRPSKTYQSFVAATDSHRELTVRGSAYMDFSLLGSPLLSRDEKHTKEREHAFIFQQVSNLTFNKFLVTYDVVSREVKCQCLLFESRGILCRHSLSVLSFERVDNMAPKYILERWSKNIKRRHTHIKSSQDEPLLEPRSKRFDELLFRSHNICEFASESEELTGILQRAFDKVMAEMQEYQERSKGKSLLSHEEATLSEVNDLQSPPRFKTRGLSKNRLGSNLEKRYQMPRRKRKRQLQGR* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3489 364 MobiDBLite consensus disorder prediction 320 345 - -
Amo19g3489 364 SMART 26again6 200 227 IPR006564 GO:0008270
Amo19g3489 364 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Amo19g3489 364 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 180 306 IPR031052 GO:0006355
Amo19g3489 364 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 124 IPR031052 GO:0006355
Amo19g3489 364 PANTHER OS03G0843700 PROTEIN 180 306 - -
Amo19g3489 364 PANTHER OS03G0843700 PROTEIN 1 124 - -
Amo19g3489 364 MobiDBLite consensus disorder prediction 320 364 - -
Amo19g3489 364 ProSiteProfiles Zinc finger SWIM-type profile. 189 225 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3489 Amo-Chr19 148681128 148683275 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g3489 FAR1 1.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3489 - - adu:107484182 479.174