Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3480 ATGGCTTTGGACTCCCACATAGAGAGAGTCTTATGGAGCGAGGAGCAAATCACTCGCCGGGTTGCCGACCTCGCCGCCCAAATCTCTGCGGACTTTCGTGCAGTTTCTCCGCCGCCGGTGGCCGTTGGCGTGGCCACCGGTGCTTTCCTCTTCCTCGCCGACCTGGTTCGAAGGATTGAGCTCCCCCTTGCCGTTGATTTCGTGAGAGCCGAATCCTACGGTTCAGGAATACAGTCCAACTGTGCGCCTACCATTTCTTTGGATTTGAAAGTTGATGTCAAAGGTCGCCACGTCATCTTGGTTGAAGACATCGTAGATACAGGACATACTTTATGTAAAGTTATTGGACACTTAAAATCAAAAGAAGCATCCTCTGTATCCGTGTGCACTTTCCTTGATAAGCCAGCAAGGAGAAAAGTTAATGTTCAACTAGTGGGTGAAGGCAAATTCTACCGGGGATTTGAGTGTCCAGACTATTTTGTTGTTGGATACGGTATGGATTTTGCGGAATTGTACAGAAACTTACCATACATCGGTGTCTTGAAGCCTGAACATTATCAATGA 564 0.4805 MALDSHIERVLWSEEQITRRVADLAAQISADFRAVSPPPVAVGVATGAFLFLADLVRRIELPLAVDFVRAESYGSGIQSNCAPTISLDLKVDVKGRHVILVEDIVDTGHTLCKVIGHLKSKEASSVSVCTFLDKPARRKVNVQLVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYIGVLKPEHYQ* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3480 187 CDD PRTases_typeI 24 139 IPR000836 -
Amo19g3480 187 Gene3D - 1 187 IPR029057 -
Amo19g3480 187 TIGRFAM HGPRTase: hypoxanthine phosphoribosyltransferase 10 182 IPR005904 GO:0004422|GO:0006166
Amo19g3480 187 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 186 - -
Amo19g3480 187 Pfam Phosphoribosyl transferase domain 16 168 IPR000836 -
Amo19g3480 187 PANTHER HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE 4 186 - -
Amo19g3480 187 SUPERFAMILY PRTase-like 4 186 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3480 Amo-Chr19 148530423 148532707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3480 1 187 PRT Gene Family AT1G71750 63.636 1.17e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3480 K00760 - gmx:100797406 299.671