Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3453 ATGTTCCGTTACGACCTCCTCGACGAGACGCAGAACAAGCTCAATTACATCCTCTCTCTCACCGTCGAGAACTTGCTCGAGCGCCGCCTCCATATTCTCGTCTTCAAGTCTGGTATAGCTAAGTCCATCCACCAGCGCTACATTAGCTCAAAATTAAAGCCACAGAGGAGGTTGATTGAGCTGGAGGCTTTGGAGAAAGTCATCCATGAAAGAATAGATGCTCCCGGAGTACCTAGGCAGTGGTGGTTTGGCGGGGGGATTAACTTGACTCCTTCTTACATTTTCGAGGAGGATTTTTGCTGTTCTAAAATGGCACTTCACATTCATGTATTGATGTTTTGCTTTAATGGTGATAGTTATTTTGACTTTTATCTCTGGGATTTGACTCTCATGTGGTATTTGTGTAGTGTAACTGCCACAAAAGTTCAATATAAAACCCCCACTAAACACACACAAAACTCTCCACTGAATAGATTGTGGAGGTTTTTAAAAACCCCCCACAAAAGACCTCGTGGCACCTCAAATTTTGGGGTTTTAGGAACTCACAAACTATTTGGTGGGGGTTTTATACCAAAATTTTGGTGTGGTATACCAAAATTTATGTGCGTGCATATTTCGGTGTAA 624 0.4263 MFRYDLLDETQNKLNYILSLTVENLLERRLHILVFKSGIAKSIHQRYISSKLKPQRRLIELEALEKVIHERIDAPGVPRQWWFGGGINLTPSYIFEEDFCCSKMALHIHVLMFCFNGDSYFDFYLWDLTLMWYLCSVTATKVQYKTPTKHTQNSPLNRLWRFLKTPHKRPRGTSNFGVLGTHKLFGGGFIPKFWCGIPKFMCVHISV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3453 207 Gene3D Coproporphyrinogen III oxidase, aerobic 42 119 IPR036406 GO:0004109|GO:0006779
Amo19g3453 207 SUPERFAMILY Coproporphyrinogen III oxidase 73 102 IPR036406 GO:0004109|GO:0006779
Amo19g3453 207 PANTHER 30S 40S RIBOSOMAL PROTEIN 1 48 IPR022801 -
Amo19g3453 207 PANTHER RIBOSOMAL PROTEIN S9, PUTATIVE, EXPRESSED-RELATED 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3453 Amo-Chr19 147971499 147976649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3453 1 44 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 77.273 1.18e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3453 K02997 - adu:107465882 177.563