Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3452 ATGGAGTCTGTCAGTGCCACCAAACTTCATCCTCCTCATGCGGAGGAAGYTCCGGTTGCTCCACCGACTRATCAGCTGTCTAGCCCTCTAMGTAAGATCATCACCGTWGCGACCCTCGCCGTAGGCATACAATTCGTGTGGGCCCTACAGCTCACCATACTCACACCCTACGTCCAAATACTCGGAACCCCTCACATGTGGGTTTCCTTCATCTGGCTCTGCGGCCCTATCTCCGGCATCATCGTCCAGCCCCTCGTTGGTTTCTATAGCGACCGCTGCACCTCCCGCTTCGGCCCCCGCCGCCCCTTCATTATCGCYGGAACCCTATCCGTTGTCTTCGCCTCCTTCCTCATCGGCTACGCTGCAGACCTAGGCCATTTCCTTGGTAACTCCGACGAAGCCAACCTCCGCCCTCGCACCATTGCCGTTTTCATCGTCGGCTTCTGGATYATCGACTTYGCCAACAACCTCCTCCAGGGACCGTGCCGCGCCTTCATCGCCGACCTCGCCGCCGGAGACCACAGCAAGACCAGAACCGGYTACGCCTTCTACACGCTCTTCACAGCCGCCGGGAACATCCTCGGCTCCGCRGCGGGATCCTCCGGCGGAATCCACCGMGTGCTACCGTTCACAAAAACGGCATCRTGYGACGAGTACTGYGCGGACGTGAAGACGTGCTTCCTCTTCGCCGTTGCGATTCAGCTAGTGCTGGTAACTGTTACTGTTACGTACGTTAAGGAAAAACCGTTACGAATAACGGRTTCAGTTGGAAATGGCGGGAAGGGAGGGATTGGGGAATTATTCGGTGCTTTGCGGGAACTCAARAGACCAATGTGGATCCTATTGTTGGTGACGTGTTTCAATTGGTTCGCGTGGTTTCCGTTTTTACTGTACAACACTGATTGGATGGGGGTTGAAGTGTACGGTGCGCAGGATAAGAAGGAGAGGGTGTACACTATGGGGATTACTTGTAGCATACCCTATACTCTAGCATCTATATTCTCCAGCGCAGCAGGGGCAGGCCAAGGGCTATCCCTTGCAATTCTGAATCTTGCAGTTGTGATACCACAGGTTAGAATTAATCGTCGCTTAATTTCACTTGACATTGGACCGTTTGATAAACTTTTTGGTGGTAACTTGCCATCGTTTGTGTTGGGTGCTGTGGCAGCTGCAATCAGTGGAATACTATCATTGTTTTTCCTTCCTTCTCCCCCGCCTGATTTCACCAAAGCTGCTGCAACCTCCACCCCTGCTGCCTTCCATTAA 1266 0.53 MESVSATKLHPPHAEEXPVAPPTXQLSSPLXKIITVATLAVGIQFVWALQLTILTPYVQILGTPHMWVSFIWLCGPISGIIVQPLVGFYSDRCTSRFGPRRPFIIAGTLSVVFASFLIGYAADLGHFLGNSDEANLRPRTIAVFIVGFWIIDFANNLLQGPCRAFIADLAAGDHSKTRTGYAFYTLFTAAGNILGSAAGSSGGIHRVLPFTKTASCDEYCADVKTCFLFAVAIQLVLVTVTVTYVKEKPLRITXSVGNGGKGGIGELFGALRELKRPMWILLLVTCFNWFAWFPFLLYNTDWMGVEVYGAQDKKERVYTMGITCSIPYTLASIFSSAAGAGQGLSLAILNLAVVIPQVRINRRLISLDIGPFDKLFGGNLPSFVLGAVAAAISGILSLFFLPSPPPDFTKAAATSTPAAFH* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3452 421 Pfam MFS/sugar transport protein 40 291 - -
Amo19g3452 421 Gene3D MFS general substrate transporter like domains 31 355 IPR036259 -
Amo19g3452 421 SUPERFAMILY MFS general substrate transporter 37 405 IPR036259 -
Amo19g3452 421 PANTHER SUGAR TRANSPORTER 321 411 - -
Amo19g3452 421 PANTHER SUGAR TRANSPORTER 25 323 - -
Amo19g3452 421 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 321 411 - -
Amo19g3452 421 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 25 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3452 Amo-Chr19 147937974 147940112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3452 320 402 Sucrose Transporter Gene Family AT5G06170 57.143 8.31e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3452 K15378 - gmx:547679 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3452 19 147937974 147940112 Amo19g3452 19 147937974 147940112 ECH