Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3451 ATGGAGTCCCTTTCCTCCACCAAACACAATCATAATCCTTCTAAGCCTAATTCTCTTCACTTAGAGAACCAGCCTCAACTACCACCCGAGCCAAGTCCTCTACGTAAGATCATCGTCGTGGCGTCTATTGCTGCCGGTGTTCAGTTTGGATGGGCTTTACAGCTCTCCTTGCTGACTCCCTACGTCCAGCTGCTTGGAATTCCACACACTTGGGCCGCTTATATCTGGCTCTGCGGCCCAATAAGTGGGATGCTTGTGCAGCCTATAGTAGGCTACCATAGTGACCGCTGCACGTCACGGTTTGGACGCCGGCGGCCCTTCATTGCTGCGGGTGCTTTGGCGGTTGCCATCGCAGTGTTCCTTATAGGCTATGCTGCTGACATGGGACACATGTTTGGTGACTCGCTGGAGAAGAAGGCCCGCCCGCGCGCCATAGCCATCTTCGTGGTCGGGTTCTGGATCCTCGACGTGGCGAACAACATGCTTCAAGGTCCATGCCGGGCACTCCTGGCCGACCTCGCTGCGGGAGATCAACGGAAAACGCGTACGGCCAACGCTGGCTTCTCGTTCTTCATGGCGGTGGGAAACGTCCTAGGATACGCCGCCGGTTCCTACAGCGGTCTCCACCACATCTTTCCGTTCACGAAAACGAAAGCATGTGATGTATACTGTGCAAATCTCAAAAGCTGTTTCTTCCTCTCAATCGCGATGTTGCTAACTCTAGCCACGGCGGCGTCGGTATACGTCAAAGAGAAACCACTGTCGCCGGAGAAATCAACGGCAGCGGACGCCGAGGACGAAGGGAAATCACACGGCATGCCGTGCTTCGGAGAATTGTCCGGCGCGTTCCGCGAATTGAAGAGGCCGATGTGGATCTTGTTGCTGGTGACGTGTCTGAATTGGATCGCGTGGTTCCCGTTCTTGCTCTTCGACACCGATTGGATGGGGAGAGAAGTGTACGGCGGAACGGTTGGTGTTGGTAAGGCATACGATATGGGCGTACGCGCCGGAGCCTTAGGGTTGATGTTGAACTCGCTGGTGCTCGGAGCGGCGTCGTTGGGGGTGGAGATTTTGGCGCGTGCAGTTGGTGGAGTTAAGAGGCTTTGGGGAATCGTGAACTTCATTCTTGCAATTTGTCTTGCAATGACGGTTTTGGTTACCAAGCAAGCCGAGCACTCGCGCCATTTCGCCCCTGGATCACACGACCCTCTTCCGCCGCCCGGACACGTTAAGGCCGGCGCTTTGGCTCTCTTCTCCGTTCTTGGAATTCCCCTTGCGATTACTTACAGCATACCCTTTGCTCTAGCATCTATATTCTCTACCTCCACAGGAGCAGGACAAGGGTTATCTCTAGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGGTGATTTCTGTAACTAGTGGACCATGGGATGCTCTGTTTGGTGGTGGAAACTTGCCAGCATTTGTGGTGGGAGCAGTGGCAGCAGCAGCAAGTGGCATATTATCTATAATCCTGCTACCATCACCGCCGCCGGATTTGGCCAAGGCCGCAACTGCCGCCGGAGGAGGCTTCCATTAA 1566 0.5447 MESLSSTKHNHNPSKPNSLHLENQPQLPPEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAYIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADMGHMFGDSLEKKARPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANAGFSFFMAVGNVLGYAAGSYSGLHHIFPFTKTKACDVYCANLKSCFFLSIAMLLTLATAASVYVKEKPLSPEKSTAADAEDEGKSHGMPCFGELSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGVGKAYDMGVRAGALGLMLNSLVLGAASLGVEILARAVGGVKRLWGIVNFILAICLAMTVLVTKQAEHSRHFAPGSHDPLPPPGHVKAGALALFSVLGIPLAITYSIPFALASIFSTSTGAGQGLSLGVLNLAIVIPQMVISVTSGPWDALFGGGNLPAFVVGAVAAAASGILSIILLPSPPPDLAKAATAAGGGFH* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3451 521 Gene3D MFS general substrate transporter like domains 31 515 IPR036259 -
Amo19g3451 521 Pfam MFS/sugar transport protein 45 303 - -
Amo19g3451 521 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 19 512 - -
Amo19g3451 521 MobiDBLite consensus disorder prediction 1 25 - -
Amo19g3451 521 TIGRFAM GPH_sucrose: sucrose/H+ symporter 33 507 IPR005989 GO:0005887|GO:0008515|GO:0015770
Amo19g3451 521 MobiDBLite consensus disorder prediction 1 26 - -
Amo19g3451 521 SUPERFAMILY MFS general substrate transporter 35 506 IPR036259 -
Amo19g3451 521 PANTHER SUGAR TRANSPORTER 19 512 - -
Amo19g3451 521 CDD MFS_SLC45_SUC 37 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3451 Amo-Chr19 147892000 147895460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3451 21 521 Sucrose Transporter Gene Family AT1G22710 70.809 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3451 K15378 - gmx:547679 867.455