Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3444 ATGTCTACAACAACACAAAGGGAAGCGTTTGGTGGCGTAGAAACTCCAAATGGAGACTCACCCAAACAACCCCCTCGAGAATCCCGTGACATCCCTCCTTTAATGTCCCCTTCTTACCCAATCACTCTCAAGTTCATGGACGTGGGGTACCGGATAAAGATAGAGAACAAGCAAGCTAAAGGAAGGTGCATTAAGAAACTTTTCGCAACTGATCGCGAGTCACCAACACCGTCCGATCAGACAAGATCAACGGTGATGCAAGAAAGAACAATTCTAAACGGAGTAACAGGGATAGCGTACCCGGGAGAGATCCTAGCCATCCTTGGTCCATCAGGAAGCGGCAAATCAACGCTCCTAAACGCGCTTGCAGGGAGACTCCATGGTCACGGCCTCACCGGAACAATTCTCGCAAACTCATCCAAGCTCACCAAACCGATTCTCCGCCGAACCGGATTCGTTACTCAGGACGACGTGCTTTACCCGCACCTCACCGTCCGCGAAACCCTAGTCTTCTGCTCCATGCTCCGCCTCCCTCGTTCGCTGCCGCGTGAGGCGAAGATTGCGGCGGCGGAGTCGGCGATTGCAGAGCTTGGACTAGGCAAGTGCGAGGACACCATAATCGGGAACAGCTTCATCCGCGGTGTCTCCGGCGGGGAGAGGAAGCGCGTGAGCATTGCGCATGAGATGCTTGTGGATCCGAGCCTGCTGCTGCTGGACGAGCCGACGTCGGGGCTGGACTCCACGTCGGCGCACCGCCTCATTTCGGTGCTCGGTTCGCTAGCGAAGAAGGGGAAGACGGTGGTTACGTCGGTGCACCAACCGTCGAGCCGCGTTTTCCAGATGTTCGATAAGGTTCTCGTGCTCTCCGAAGGGAATTGCCTCTACTTCGGTAAAGGATGCGACGCCATGCGGTACTTTGAGTCCGTTGGTTTTGTGCCATCTTTTCCGATGAACCCCGCCGATTTCCTTCTCGATCTCGCTAACGGTGTTAGCCATGTTGATGGTGTAAGTGAAAGAGATAAGCCAAACATAAGGCAGAACCTAATTCATTCATACAACACAACACTAGCTCCAAAGGTAAAAGCTTTATGCATTGACACTCCCAACATTGTTAATCCTACAAAGAACACACACCCTATGGGAAGAAGCAGATATAGTGACAGGGTTAGCTTCTTAGATTGGTTCAACCAATTCAGCACACTCTTCCAAAGAAGCCTCAAAGAGAGAAAGCATGAATCTTTCAACACTCTGAGAGTGTTCCAAGTCATTGCAGCTGCACTATTAGCAGGCCTAATGTGGTGGCACTCTGACTACAGAAATGTTCAGGACAGGCTTGGCCTACTCTTCTTCATTTCAATCTTCTGGGGTGTATTCCCATCCTTCAACTCTGTTTTCGCCTTCCCCCAAGAGCGCGCCATCTTCATGAAAGAAAGGGCCTCTGGAATGTACACATTGTCATCCTACTTCATGTCTCGAATAGTGGGTGATCTTCCAATGGAGCTTATCCTGCCCACAATTTTCCTCATTGTGACATATTGGATGGGAGGCCTAAAGCCTGATCTGGTGGCATTTCTATTGACATGGTTGGTCATCCTTGGATATGTCCTTGTCTCGCAGGGTCTTGGACTCGCCTTAGGCGCCGCGATAATGGATGCCAAACAAGCTTCAACTGTTGCAGCAGTGACAATGCTAGCATTTGTGCTAACAGGTGGATACTATGTCCATAAGGTTCCAGCATGTATGGCTTGGATCAAATACATATCCACAACTTTTTACTGTTATAGGCTTCTGACTAGGATTCAGTATGGTGATGGAAGGAAAATCTCATACATGTTGGGTTGCAATCATGGTGGTGGAGACAGGGCTAATTGCAAGTTTCTTGAAGAGGATGTGATGGGCCAAATTGGCACTGTGGGAAGCATTGGTGTCTTGTTTCTCATGTTTGTAGGGTACAGATTATTGGCCTACCTTGCATTGAGGCGCATCAAGATTTAG 1995 0.4962 MSTTTQREAFGGVETPNGDSPKQPPRESRDIPPLMSPSYPITLKFMDVGYRIKIENKQAKGRCIKKLFATDRESPTPSDQTRSTVMQERTILNGVTGIAYPGEILAILGPSGSGKSTLLNALAGRLHGHGLTGTILANSSKLTKPILRRTGFVTQDDVLYPHLTVRETLVFCSMLRLPRSLPREAKIAAAESAIAELGLGKCEDTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLLLDEPTSGLDSTSAHRLISVLGSLAKKGKTVVTSVHQPSSRVFQMFDKVLVLSEGNCLYFGKGCDAMRYFESVGFVPSFPMNPADFLLDLANGVSHVDGVSERDKPNIRQNLIHSYNTTLAPKVKALCIDTPNIVNPTKNTHPMGRSRYSDRVSFLDWFNQFSTLFQRSLKERKHESFNTLRVFQVIAAALLAGLMWWHSDYRNVQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMSRIVGDLPMELILPTIFLIVTYWMGGLKPDLVAFLLTWLVILGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPACMAWIKYISTTFYCYRLLTRIQYGDGRKISYMLGCNHGGGDRANCKFLEEDVMGQIGTVGSIGVLFLMFVGYRLLAYLALRRIKI* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3444 664 Gene3D - 81 309 IPR027417 -
Amo19g3444 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 308 IPR027417 -
Amo19g3444 664 Pfam ABC transporter 93 243 IPR003439 GO:0005524
Amo19g3444 664 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 21 662 - -
Amo19g3444 664 MobiDBLite consensus disorder prediction 1 36 - -
Amo19g3444 664 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 662 - -
Amo19g3444 664 SMART AAA_5 101 292 IPR003593 -
Amo19g3444 664 Pfam ABC-2 type transporter 397 601 IPR013525 GO:0016020|GO:0140359
Amo19g3444 664 CDD ABCG_EPDR 89 297 - -
Amo19g3444 664 Pfam ABC-2 type transporter 272 344 IPR043926 GO:0140359
Amo19g3444 664 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 315 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3444 Amo-Chr19 147817283 147823932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3444 91 297 Calmodulin-binding Proteins AT2G36910 31.280 7.74e-14 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3444 19 147817283 147823932 Amo19g3444 19 147817283 147823932 ECH