Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3382 ATGGAAGATTCAGAGGAAGAAGAGCTCCTGAACCTTAGCCTTTCAGTGGCTGCTGATAGGGAAAGAAAGAAAAAGAAAGGAAAGACCATCACAGATAACAACAACAACAACAATATCATGATGATGATGAGTTGTAGTAGTAGCACAACTATGATTACCTCCTTTGATCATGAGGCCTATGAAGCTAAAATCTTTAGGCTTCTACAAATGAGAGATCAAATGCTTAGACAAGATCATAGGAATCATGATAATAGAAACAAAGGAGGAGGAGGAGGAGGAAGCTTTGTTGTTCTTGGGAATAACAACAGCAATGGCCTCCCTTTGATCCATTTGCTTCTCTCAACCGCCACTGCCGTCGACGGTAACAACTTCGGCGCCGCCTTGAACAACCTCACCGACCTCTACCAGAGCGTTTCCCTAACCGGTGACTCAGTGGAGCGTGTTGTGGCCTATTTCTCTGATGGCTTAACCGCAAGGCTTCTCACAAGAAAGTCACCTTTCTATGACATGATCATGGAGGAACCAACTTCTGAGGAAGAGTTTCGTGCTTTCACTGATCTCTATAGAGTCTCTCCCTACTTCCAATTCGCTCATTTCACTGCCAATCAAGCAATCTTGGAGGCCTTCGAAAGGGAGGAAGATCGTAACAACCGTTCCATTCATGTCATCGATTTCGATGTCTCTTATGGCTTCCAGTGGCCTTCTCTGATACAATCGCTATCAGAGAAGGCCACTAGTACCAGCCGTATTTCCCTGAGGGTAACGGGATTCGGGAAGAATCTGAAGGAGCTGCAAGAAACGGAGTCAAGATTAGTGAGCTTCTCTAAGGGATTTAGCAACCTAGTGTTTGAGTTTCAAGGGCTTCTGAGAGGGTCAAGGGTGATAAACCTAAGGAAGAAGAAGAACGAAACGGTGGCAGTCAACTTGGTATCATACTTGAACACGTTGAGTTGTTTCATGAAGATCTCAGACACATTGGGCTTTGTGCATTCACTTAGCCCCTCCATTGTTGTCTTGGTTGAGCAAGAAGGTAGCAGGACCCCAACAAGGACATTCTTGTCAAGATTCACAGACTCGTTGCACTACTTTGCAGCCATGTTCGATTCTCTCGACGATTGTCTTCCGTTGGAGAGTGCTGAGAGGCTCAGGATTGAGAAGAAGCTTCTTGGGAAAGAGATCAAGAACATGCTCAACAACTATGAAAACAACAACATTGGTGATTGTGCTAAGTATGAGAGGATGGAGGCATGGAAGGCGAGGATGGAGAATCATGGTTTTGTTGGGAATAAGATTAGCTCCAAGGCCATGATTCAAGCCAAGCTACTTTTGAAGATGAGGACTCATTATTGTCCAATGCAGTTTGAAGAAGAAGATGACAGCGACGGCGGCGGCGGCGGTGGCGGTTTCAGGGTTTCGGAGAGAGATGAAGGAAGGGCTGTCTCTTTAGGGTGGCAAAATAGGTTTCTTCTTACTGTCTCAGCTTGGCAACCACTTTCTCTAATCTGA 1506 0.4548 MEDSEEEELLNLSLSVAADRERKKKKGKTITDNNNNNNIMMMMSCSSSTTMITSFDHEAYEAKIFRLLQMRDQMLRQDHRNHDNRNKGGGGGGSFVVLGNNNSNGLPLIHLLLSTATAVDGNNFGAALNNLTDLYQSVSLTGDSVERVVAYFSDGLTARLLTRKSPFYDMIMEEPTSEEEFRAFTDLYRVSPYFQFAHFTANQAILEAFEREEDRNNRSIHVIDFDVSYGFQWPSLIQSLSEKATSTSRISLRVTGFGKNLKELQETESRLVSFSKGFSNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLSPSIVVLVEQEGSRTPTRTFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKNMLNNYENNNIGDCAKYERMEAWKARMENHGFVGNKISSKAMIQAKLLLKMRTHYCPMQFEEEDDSDGGGGGGGFRVSERDEGRAVSLGWQNRFLLTVSAWQPLSLI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3382 501 Coils Coil 379 399 - -
Amo19g3382 501 PANTHER OSJNBA0084A10.13 PROTEIN 8 496 - -
Amo19g3382 501 ProSiteProfiles GRAS family profile. 99 496 IPR005202 -
Amo19g3382 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 496 IPR005202 -
Amo19g3382 501 Pfam GRAS domain family 108 496 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3382 Amo-Chr19 146871809 146873392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3382 116 499 GRAS Transcription Factor Family AT3G54220 34.351 4.82e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo19g3382 GRAS 1.3e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3382 - - ahf:112776716 910.598