Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3367 CAGAGACATCTCTCTGATTCTCATGCAAAGTTAAAGGAATTGGAGATGGGGAGGAAAGGGAGTTGGTTCTCTGCTGTGAAGAAAGTTTTTGGTTCTGAAAACAAAAAGGACCAGGAAAAGAACACAAAACCACAGAAAACCCATAGTCATGGCCATAGCCATAGCAATAGTAAGTCCAAATTAGGATGTTTTGGACACCATGATAACAATGAAGCCGGAAATGAAGCGCAGGGAATAGTAGTTGTTCCGGCGCTTCCGCGTAAGAAAGAACCAAAACAAGCAAGAGTGGCAGGTCAGAATGAGCCGGACCAGCAGGCTTTCTCTTTGGTCTTGGCTACTGCTGTCGCAGCAGGTGCTGCTGTCGCGGCCGCGGCTGAGGCTACTCGTCCCAAGACTGTGACGCCTCGTCGCCGTGAAAAACTGAAGGATGATGAAGCAGCAATCATGATTCAGACAGCCTTCCGTGGATATCTGGCGAGGAAAAAACTGCGAGGCTTGAGAGGTTTGTCGAGGTTGAGAACATTGGTAAGAGGGCAATCTGTGAAAAGACAATCAGCCTCTACCTTGCAATGCATGCAGACTCTTTCGAAACTGCAGTCTCAAGTTCGCGCGAGGAAGATCAGAATGTCTGAAGAGAACCAGGCTCTTCAGCGCCAGCTCCTGCAGAAACGGGAGAAGGAGCTTGAGAAGTTGCAAGCTGCTCAAGCTGAATGGGATCATAGAAAGGATTCAAAAGAGCAAGTTGAAGCAAAATTGTTGCACAGGCAAATTGCTACCATGAGAAGGGAGAAGGCTCTGGCTTATTCAATGACACATCAGCAAACTTGGAGGAACAATCTAAAATCAGGCACGAATGCCTCGTTTATGGATCCAAACAATCCTCACTGGGGCTGGAATTGGCTTGAGAGATGGATGGCTGTAAGGCCATGGGAGGGACAAAGCACATTCCAACACAATGAGCCTGCACCTCTAATTAGCACAGCCAGAAGCACGCTATCAGTTGGCGAAATAACCAAACTGTATACTCTACGCGACGATGCTAACATTAGCAAGAACTCCCCTAGGGCCATAAAAACAGGCCGGTCGCGCAGCGGCCTTAACTCGCCCTCAAATGTACTCACCCCATCAAAGTCCACAGCCTTTTTCACAGCTTCCCCCACTCCAAGGAGTCTCAGGGCAGCTAGTCCTAAACTTGGTTCCTGGGGTGGTGATGGAGACAAGAGGAATGCATTTGGCATTAGGAGGGAGGGCAACCGTAGGCACAGCATCGCCATTTCGCCTGCGAGGGATGATGAGCTCCTTAACTCACCTATGAACAGATCACCAAAGAAAGCAGCAGCAACAAAGGCCTCAAAATCCTTCAACATGGCAAAGAGCAGTGTTAGCTCATCTGAGAAATCAAGTCCTGCTGCTGCAGTAAACAAGAGACTCTCTTTGTCTCAATCTCCAACTTCAAATTCAAGAAGGCTTTCTACTCCAGGCAAGGTGGGGACAATTTCCAATAAGAGCAATGCTGCTGGTGCTACTATGAGAAAGTGA 1539 0.4828 QRHLSDSHAKLKELEMGRKGSWFSAVKKVFGSENKKDQEKNTKPQKTHSHGHSHSNSKSKLGCFGHHDNNEAGNEAQGIVVVPALPRKKEPKQARVAGQNEPDQQAFSLVLATAVAAGAAVAAAAEATRPKTVTPRRREKLKDDEAAIMIQTAFRGYLARKKLRGLRGLSRLRTLVRGQSVKRQSASTLQCMQTLSKLQSQVRARKIRMSEENQALQRQLLQKREKELEKLQAAQAEWDHRKDSKEQVEAKLLHRQIATMRREKALAYSMTHQQTWRNNLKSGTNASFMDPNNPHWGWNWLERWMAVRPWEGQSTFQHNEPAPLISTARSTLSVGEITKLYTLRDDANISKNSPRAIKTGRSRSGLNSPSNVLTPSKSTAFFTASPTPRSLRAASPKLGSWGGDGDKRNAFGIRREGNRRHSIAISPARDDELLNSPMNRSPKKAAATKASKSFNMAKSSVSSSEKSSPAAAVNKRLSLSQSPTSNSRRLSTPGKVGTISNKSNAAGATMRK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3367 512 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 16 506 - -
Amo19g3367 512 Coils Coil 206 241 - -
Amo19g3367 512 ProSiteProfiles IQ motif profile. 143 171 IPR000048 GO:0005515
Amo19g3367 512 Pfam IQ calmodulin-binding motif 145 164 IPR000048 GO:0005515
Amo19g3367 512 SMART iq_5 142 164 IPR000048 GO:0005515
Amo19g3367 512 MobiDBLite consensus disorder prediction 446 512 - -
Amo19g3367 512 MobiDBLite consensus disorder prediction 352 512 - -
Amo19g3367 512 MobiDBLite consensus disorder prediction 30 46 - -
Amo19g3367 512 MobiDBLite consensus disorder prediction 352 390 - -
Amo19g3367 512 MobiDBLite consensus disorder prediction 29 72 - -
Amo19g3367 512 MobiDBLite consensus disorder prediction 408 427 - -
Amo19g3367 512 Gene3D - 134 171 - -
Amo19g3367 512 PANTHER IQ-DOMAIN 5-RELATED 16 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3367 Amo-Chr19 146587964 146590928 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3367 16 496 IQD Protein Family AT5G03040 39.715 3.56e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3367 - - gmx:100807725 413.69