Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3354 ATGCCTCCTGAACCGTTGCCTTGGGATCGGAAGGACTTCTTCAAGGAGAGGAAACACGAGAGGTCTGAGTCTCTGGGCTCCGTTGCCAGATGGAGAGATTCCTCTCACCACCGCGACTTCCACCGTTGGGGATCCGCCGAGTTCCGCAGACCTCCGGGTCATGGTAAGCAGGGCGGTTGGCACGTGTTTTCTGAAGATTCTGGTCATGGGTATGGGATTTCACGGTCAAGCAGTGAAAAGATGCTGGACGAAGATTGCCGGCCATCRGTGTCTCGTGGGGATGGAAAATATGGCCGGGGCAGTAGAGAAAATAGAGGGCCGTTTGGGCAGAGAGATTGGAGAGGACAGTCGTGGGAAACAACCAATGGTTCTATGAATTTACCAAGAAGGCCCCCGGATGTGAATAATGATCATAGGTCAGTTGACGACAACCTAACATATTCCRCTCATCCACATTCTGATTTTGTAAACACTTGGGATCCACACCACTTGAAAGACCAGCATGATAAGATTGGTGGTGCCAATGGGTTCGGAACAGGCGCAAGAAGTGATAGAGAAAATTCTCTGGCTTCAATTGACTGGAAGCCACTTAAATGGACCCGATCTGGAAGCTTGTCRTCGAGAGGCTCTGGTTTTAGCCACTCGAGTAGCTCAAGGAGCGCGGGAGGGGCAGATTCCCATGAAGCAAAGGCCGAGTTACATCCCAAAAACGCAACTGTTAATGAGTCACATTCAGGGGAAGCTGCTGTGTGTGTTACATCTTCTGCACCATGTGAAGATACAACTTCCAGAAAGAAGCCGAGGCTAAAYTGGGGAGAGGGACTTGCAAAGTATGAGAAGAAAAAGGTTGAAGTGCCAGATGGAAGTGCTAACAAAGATGGACCTGTCTTGTCTAATGGTAGTATTGAACCTTGTGCTTTCCCCGGTTCCAGCTTAGTAGATAAAAGCCCAAAAGTTACAGGATTCTCAGACTGTGCATGTGCATCTCCTGCAACTCCATCATCGGTTGCCTGCAGTTCCTCCCCAGGTGTGGATGATAAGTTATTTGGAAAACCTGCAAATGTAGACAATGATGTTAGTAATTTGACTTGTTCTCCTGTTCCTGGATCCCAAGACCATTTTCAGAGGTTTTCTTTTAATTTAGAGAAATTGGATATTGAATCCTTGAATAGTCTGAATTCTTCAATTATTGAGTTGATACAATCTGATGATACAAGTTATGTGAATTCTGGTCCAATGAGGTCCACTGCAATGAATAAGTTAYTGATATGGAAAGCCGACATTTCAAAGGTATTGGAGACAACCGAATCTGAAATTGATTCACTTGAAAATGAACTGAAATCTCTAAGATCTGCATCTGGGGATAGAGGTTCATATCCAGCTGTTTTGGGCTCACAGATGGTTGGCAACAATGAAAATCCTTTTGAAGTACCTGTTGGTGTCTCTGATGAAGTTACTCGGCCAGAACCTTTGAAAATTCTTTCTTCTGACGACCCTGATGCTGAGAAATTGCCCCTTTYAACCAACTTAAATAGTATTCATGAGAATGGAAAGGAAGAGGACATTGATAGTCCTGGTTCAGCAACATCTAAATTAAGTGAGCCTCCGCCTTTGGTTAAAGCAGTTTCGTCAAGTGATACAAGGAGATATGATACCTTCTTGGAGGATGCCAATGCTGGTCAGTCTAATGGCATGAAATGCTTAATTCCCTGTACTACAAGGAAGTATCCTAGTAACTCTGCTTGCAGTGATGTCAATGCGKCTTCGGAAGTGCCAGATAGYATTATTACTGCCTCTGGTGCAAGCTTAYGKTCTAGCACTGAGGATAGTTTATATAAGAAAATTATTTCTTCCAACARAGAATTGGCAAAAAGTGCATGTGGAGTATTTGCTAAGTTATTGCCCSAMGGATATACTAAAATTGATAAGGTRGGGGCCAGCAGTGACKTGTGCTCTCAGACATCCATTAYGGAGAAGTTTGCTGAGAAAAAGCAGTTTGCAAGATTTAAAGAGAGAGTTATCACACTTAAGTTCAAAGCCCTGCATCACCTGTGGAAGGAAGATATGCGCCTACTGTCTATAAAGAAATGCCGGCCAAAATATCACAAGAAACATGAACTAAGTGTGCGGTCTACCTTTAATGGTAATCAGAAGAACCGGTTCTCCATTCGGTCTCGTTTTCCTTTACCTGCAGGAAATCATCTGAGCCTSGTTCCAACAGCCGAGGTAATTAATTTTACAAGAAAACTGCTCTCAGAACCTCARGTTAAAATTCACAGGGATGCCCTGAAGATGCCAGCATTAGTCTTGGATGAGAAGATCCCAAAGTTCATATCTAGTAATGGGCTTGTCGAAGATCCATTGGCTATTGAGAAGGAAAAGGCTTTGATTAATCCTTGGACATCAGAAGAGAGAGAAATTTTCCTKGAAAAATTTGCTGTCTTTGGAAAAGATTTTCGGAAGATCGCTTCTTTCCTTSATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCGGATTGTTTTGAAAAACTTAAGAAGCAGCAGAAGTTAGGGAAGTCATTTTTAGCCAAAACTGACTTGGTAGCATCGGGTAAAAAATGGAACCATGAAGCGAATACTGCTTCACTTGACATTTTGAGTGCTGCTTCAGTGATGGCTGATGGYTTTGCATGTAACAAGAAAATGCGTCCTGGGAACTTCCTTATGGGTGGATATGTTAATGTGAAAGCCTCAAGGGTTGATGATAGCATCAGAGAAAGATCAAGCAGCTTTGACATTCTTGGGGATGAGAGGGAGRCTTTTGCTGATGTAATGGCTTCATCCGAGGCCATGAGTTTCTGTGGGACAAGTTCAGTTGAACCTGTAGAAGGTAGCCGAGATAGTAGGTTGATGCCTGATACTGCTGAGAATGTTGATGACGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCTACTGATTGGACAGATGATGAAAAGGCAGCTTTTATACAAGCTGTATCATCTTTTGGTAGGGATTTTGTGAAGTTAGCGCGATGCATTGGAACAAGGTCMCCAGAACAATGCAAAGTTTTYTTCAGCAAGGCTCGAAAATGCCTCGGMTTAGATCTCATGCGCCCTATGCCTGAAAAYGTTGGATCACCAGCAAATGATGGTGCAAATGGYGGGGGTAGYGACACAGATGATGCTTGTGYTGTAGAGACAGGTTCAGTGGTTGGCACTGACAAGTCTGGCACTAAGACAGATGAGGACCTGCCTTCATCTGTCATAAACACCTACCATGATGAATCAGATCCTGTGGAAGYTAGGAACCTGGCAGCTGAATTAAATGAGCCTAAAGAGGAGGATGATACAGTAGTCGATCATGAAGATGCAAACTTGGTTAGCGATGGGGTTGTCTTGTACAATTCTGATAAGTCTGGTTCAGTCAATGGGCAGGCTCCTATAGTTATGACAGAWAGCACAACAGTTGGAAAAGACAAAGCCATTAAATTCGGGGGTGCAGACTTGGTGTCTATTTCTGCCCTCGACACAACTGAACCATGTGAGAGGAGTTTGGCTGGTCAGGATAATGTAGTTACTGAAGTTTCTTCTGGGGTTCTTGGAAGTGGATTGGAKAGKCAAAGTGTTCCTTCAACYCAATGTCYTGATGATAGAGGGGATAAACTGGTGGCTGTTACAGCTGTTGGARTTGAACTGAAAAGCTCGGTTCAGGATTCATGTACTACTACAGTAAATGCTTCAGTCTCATCTGTGGGCAATTCTTGTTCAGGATTGAGTTTTGATACTGAAAGTAAGCATATGKCCCTTGGAAAGCCTGTMTCTGCATTATATGTYGARGATCTTCATGCAACTGCAAATTCATTGTCACAAAATRCTTCTGTTTCAGCCGYYGTTCAATGCGAGAAAACAGCTACTCAGGATCAACTGTCCTGTACTACTGAGACTCCAGGTGGGAGAAATTTGCAGTGTCATAATCCCATCAGCAATGGTGACCATCAGCTTCCTGTGCCTGGGAATCGYGTGGATCGTGCCRACAGCATCCTCCATGGTTATCCTTTGCAAATGGCCATTAAGAAAGAAGTGAATGGAGATATAAAATGCAGCAGTTCAGCAAACGAGTTGCCCCTTCTATCCCGAAAAGATGAACAAGATGATCATTTCAAAGCAAGGTTAAGCTATTCGTCAGATTCGGAAAAAACATCCAGAAATGGTGATGTGAAATTRTTTGGGAAGATATTAACCAATCCTTCATCCACACAGAAACCTAATTTGACCACCAAGTCATGTGAAGAAAATGGCATCCATCATCCCAAATCTAGCAGCAAGCTTTCAAGTTTGAAATATGCTGATGGAAATTTCAAGATGTTGAAGTTTGAACGAGATGACTGCAGTGAGTATCTTGGCCTTGAAAATGTCCCCTTGCGGAGCTATGGTTACTGGGATGGGAACCGAATACAGACTGGTCTCACATCATTGCCTGATTCTGCCATCCTGCTAGCAAAGTATCCRGCTGCCTTCAGTAATTATCCGTCTTCTTCAGCCAAATTGGAGCAGCAGTCGTTCCATGCATTTGGTAAGAATAATGAAAGGCACCTGAGTGGRKCTCCTGCTTTTACAGCTAGGGACATGAATGGCAGTAATGCTGTGATTGATTATCAGATGCTTAGAAGTAGGGATGGTTCTGTGGTTGATGTAAAGCACTGCCAAGACGTGTTCTCTGAGATGCCACGGAGAAATGGGTTYGAAGCAATCTCAAGTTTGCACCAGCAGCAGCAGGGCAGAGGAGTGGTGGGAATGARTAGTGGTGGTGTTGGAGGAACGGGGATTGTGGTTGGATCATGCAGCGGTGTCACGGATCCTGTGGCAGCCATAAAAATGCATTACYCYAATTCTGACAAGTATGGTGGTCAARCTGGGAATAATATCAGCAGCAGAGAAGATGAATCTTGGGCTGGRGGGAAAGGGGACTTAGGGAGGTAG 5004 0.4347 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFHRWGSAEFRRPPGHGKQGGWHVFSEDSGHGYGISRSSSEKMLDEDCRPSVSRGDGKYGRGSRENRGPFGQRDWRGQSWETTNGSMNLPRRPPDVNNDHRSVDDNLTYSXHPHSDFVNTWDPHHLKDQHDKIGGANGFGTGARSDRENSLASIDWKPLKWTRSGSLSSRGSGFSHSSSSRSAGGADSHEAKAELHPKNATVNESHSGEAAVCVTSSAPCEDTTSRKKPRLNWGEGLAKYEKKKVEVPDGSANKDGPVLSNGSIEPCAFPGSSLVDKSPKVTGFSDCACASPATPSSVACSSSPGVDDKLFGKPANVDNDVSNLTCSPVPGSQDHFQRFSFNLEKLDIESLNSLNSSIIELIQSDDTSYVNSGPMRSTAMNKLLIWKADISKVLETTESEIDSLENELKSLRSASGDRGSYPAVLGSQMVGNNENPFEVPVGVSDEVTRPEPLKILSSDDPDAEKLPLXTNLNSIHENGKEEDIDSPGSATSKLSEPPPLVKAVSSSDTRRYDTFLEDANAGQSNGMKCLIPCTTRKYPSNSACSDVNAXSEVPDSIITASGASLXSSTEDSLYKKIISSNXELAKSACGVFAKLLPXGYTKIDKVGASSDXCSQTSIXEKFAEKKQFARFKERVITLKFKALHHLWKEDMRLLSIKKCRPKYHKKHELSVRSTFNGNQKNRFSIRSRFPLPAGNHLSLVPTAEVINFTRKLLSEPQVKIHRDALKMPALVLDEKIPKFISSNGLVEDPLAIEKEKALINPWTSEEREIFLEKFAVFGKDFRKIASFLXHKTTADCVEFYYKNHKSDCFEKLKKQQKLGKSFLAKTDLVASGKKWNHEANTASLDILSAASVMADGFACNKKMRPGNFLMGGYVNVKASRVDDSIRERSSSFDILGDEREXFADVMASSEAMSFCGTSSVEPVEGSRDSRLMPDTAENVDDETCSDESCGEMDPTDWTDDEKAAFIQAVSSFGRDFVKLARCIGTRSPEQCKVFFSKARKCLGLDLMRPMPENVGSPANDGANGGGSDTDDACXVETGSVVGTDKSGTKTDEDLPSSVINTYHDESDPVEXRNLAAELNEPKEEDDTVVDHEDANLVSDGVVLYNSDKSGSVNGQAPIVMTXSTTVGKDKAIKFGGADLVSISALDTTEPCERSLAGQDNVVTEVSSGVLGSGLXXQSVPSTQCXDDRGDKLVAVTAVGXELKSSVQDSCTTTVNASVSSVGNSCSGLSFDTESKHMXLGKPVSALYVEDLHATANSLSQNXSVSAXVQCEKTATQDQLSCTTETPGGRNLQCHNPISNGDHQLPVPGNRVDRAXSILHGYPLQMAIKKEVNGDIKCSSSANELPLLSRKDEQDDHFKARLSYSSDSEKTSRNGDVKLFGKILTNPSSTQKPNLTTKSCEENGIHHPKSSSKLSSLKYADGNFKMLKFERDDCSEYLGLENVPLRSYGYWDGNRIQTGLTSLPDSAILLAKYPAAFSNYPSSSAKLEQQSFHAFGKNNERHLSGXPAFTARDMNGSNAVIDYQMLRSRDGSVVDVKHCQDVFSEMPRRNGFEAISSLHQQQQGRGVVGMXSGGVGGTGIVVGSCSGVTDPVAAIKMHYXNSDKYGGQXGNNISSREDESWAGGKGDLGR* 1668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3354 1667 MobiDBLite consensus disorder prediction 203 245 - -
Amo19g3354 1667 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1637 - -
Amo19g3354 1667 Gene3D - 776 848 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 114 129 - -
Amo19g3354 1667 ProSiteProfiles SANT domain profile. 993 1041 IPR017884 -
Amo19g3354 1667 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1637 - -
Amo19g3354 1667 SUPERFAMILY Homeodomain-like 992 1041 IPR009057 -
Amo19g3354 1667 Pfam Myb-like DNA-binding domain 799 840 IPR001005 -
Amo19g3354 1667 Pfam Myb-like DNA-binding domain 994 1034 IPR001005 -
Amo19g3354 1667 SMART sant 991 1039 IPR001005 -
Amo19g3354 1667 SMART sant 796 844 IPR001005 -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 1642 1667 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 1425 1444 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 156 170 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 962 995 - -
Amo19g3354 1667 Coils Coil 425 452 - -
Amo19g3354 1667 Gene3D - 963 1047 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 1050 1102 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 977 992 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 78 109 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 491 541 - -
Amo19g3354 1667 CDD SANT 995 1033 IPR001005 -
Amo19g3354 1667 ProSiteProfiles SANT domain profile. 795 846 IPR017884 -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 45 184 - -
Amo19g3354 1667 MobiDBLite consensus disorder prediction 203 223 - -
Amo19g3354 1667 SUPERFAMILY Homeodomain-like 783 843 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3354 Amo-Chr19 146217037 146225500 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo19g3354 Myb_DNA-binding 1.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3354 - - adu:107467909 3189.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3354 19 146217037 146225500 Amo19g3354 19 146217037 146225500 ECH