Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3341 ATGGGTTTTTATCTTTCCTATGTTGTTTTGTTGGTCTTGTTCATTTTTGTGGGAGTTTCAGTTTCCTTATCTTCTTCACCAATTGAAGATCAGAAGAGAGATAGGGTCACTGATTTGCCAGGGCAACCCAAGAATGTGGGGTTTGCTCATTATTCTGGCTATGTCACTGTGAATGAGAAGAGTGGGAGTGCATTGTTCTACTGGCTCTTTGAGGCTCCGGCGAGCCGCCGACCGGAGAAGAGACCACTGGTTTTGTGGCTCAATGGTGGCCCTGGATGCTCCTCCATTGCTTATGGTGCATCTGAAGAAATTGGCCCTTTTAGGATTAGGCCTGATGGGAAGTCACTTTACTTGAACCCTTATGCTTGGAACAAATTGGCAAACATATTGTTCCTTGATTCTCCTGCTGGTGTCGGATTTTCGTACTCGAATAAGACGACGGATCTGTACACATTTGGTGACCAGAGAACAGGTAATGAAGTTGTCACATTTGTTCATCATGTCGATTTTGCTTTGTTCATTATGATCTTGAGTTGGTTGTGTGTTTGTATTTGGGATCTTGGGGTTCCTGAATTTACAGCTGAAGATGCATATACATTTCTTGTTAAGTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAGTTCTACATTGCTGGAGAAAGCTATGCAGGGCACTATGTTCCTCAGTTGTCTCAAATTGTTTATGAGAGAAACAAGGGAATCAAGAATCCAGTGATAAATTTCAAGGGATTTATGGTTGGAAATGCTGTTACTGATGATTATCATGATTATGTTGGAACATTTGAGTATTGGTGGACTCATGGTTTGGTATCGGATTCAACATACAGGATGCTGAGAATTGCTTGTGATTTCGGTTCTTCACAGCATCCATCAGTGCCTTGCATGCAAGCTCTTAAAGTTGCAGTTGTTGAGCAGGGTAACATTGATCCTTATAGCATTTATACGCAGCCTTGTAACGATACGTCCTCACTCAGACGCGACTTGGGGGGTCGCTATCCGTGGATGTCTCGAGCATACGATCCCTGCACTGAGAGGTATTCCGACTTGTATTTCAATCATCCAGAAGTTCAGAAGGCGCTTCATGCCAATGTAACCGGAATTCCTTATTCATGGAAGACTTGCAGTGATATTGTGGGGAACTATTGGACTGATTCTCCTCTAACTATGCTTCCTATATATCGCGAACTTATTAGTGCTGGTCTCAAGATATGGGTATACAGTGGAGACACTGATTCAGTGGTTCCAGTCACTGCGACTCGATATTCAATCGACGCATTGAAGCTACCAACCCTCACCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGTTGGAGTCAAGTTTACAAAGGACTCACATTAGTAACTGTAAGAGGAGCCGGCCATGAGGTTCCGCTTCATCGGCCGCGCCAAGCCTTCATTCTTTTCAGGTCTTTCTTGGAGGACAAGCCAATGCCATCTTCAAGTTAG 1497 0.4362 MGFYLSYVVLLVLFIFVGVSVSLSSSPIEDQKRDRVTDLPGQPKNVGFAHYSGYVTVNEKSGSALFYWLFEAPASRRPEKRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLYLNPYAWNKLANILFLDSPAGVGFSYSNKTTDLYTFGDQRTGNEVVTFVHHVDFALFIMILSWLCVCIWDLGVPEFTAEDAYTFLVKWFERFPQYKHREFYIAGESYAGHYVPQLSQIVYERNKGIKNPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLRIACDFGSSQHPSVPCMQALKVAVVEQGNIDPYSIYTQPCNDTSSLRRDLGGRYPWMSRAYDPCTERYSDLYFNHPEVQKALHANVTGIPYSWKTCSDIVGNYWTDSPLTMLPIYRELISAGLKIWVYSGDTDSVVPVTATRYSIDALKLPTLTNWYPWYDNGKVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQAFILFRSFLEDKPMPSSS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3341 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Amo19g3341 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Amo19g3341 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Amo19g3341 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Amo19g3341 498 Gene3D - 350 386 - -
Amo19g3341 498 Gene3D - 397 490 - -
Amo19g3341 498 Pfam Serine carboxypeptidase 40 490 IPR001563 GO:0004185|GO:0006508
Amo19g3341 498 PANTHER CARBOXYPEPTIDASE 12 165 - -
Amo19g3341 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 461 478 IPR033124 GO:0004185
Amo19g3341 498 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Amo19g3341 498 Gene3D alpha/beta hydrolase 28 336 IPR029058 -
Amo19g3341 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 193 496 IPR001563 GO:0004185|GO:0006508
Amo19g3341 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 165 IPR001563 GO:0004185|GO:0006508
Amo19g3341 498 SUPERFAMILY alpha/beta-Hydrolases 31 495 IPR029058 -
Amo19g3341 498 PANTHER CARBOXYPEPTIDASE 193 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3341 Amo-Chr19 146105721 146109854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3341 360 494 Calmodulin-binding Proteins AT2G22960 27.941 5.15e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3341 K16297 - gmx:100805722 835.099