Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3340 ATGCCTCCTGAACCGTTGCCTTGGGATCGGAAGGACTTCTTCAAGGAGAGGAAACACGAGAGGTCTGAGTCTCTGGGCTCCGTTGCCAGATGGAGAGATTCCTCTCACCACCGCGACTTCCACCGTTGGGGATCCGCCGAGTTCCGCAGACCTCCGGGTCATGGTAAGCAGGGCGGTTGGCACGTGTTTTCTGAAGATTCTGGTCATGGGTATGGGATTTCACGGTCAAGCAGTGAAAAGATGCTGGACGAAGATTGCCGGCCATCGGTGTCTCGTGGGGATGGAAAATATGGCCGGGGCAGTAGAGAAAATAGAGGGCCGTTTGGGCAGAGAGATTGGAGAGGACAGTCGTGGGAAACAACCAATGGTTCTATGAATTTACCAAGAAGGCCCCCGGATGTGAATAATGATCATAGGTCAGTTGACGACAACCTAACATATTCCGCTCATCCACATTCTGATTTTGTAAACACTTGGGATCCACACCACTTGAAAGACCAGCATGATAAGATTGGTGGTGCCAATGGGTTCGGAACAGGCGCAAGAAGTGATAGAGAAAATTCTCTGGCTTCAATTGACTGGAAGCCACTTAAATGGACCCGATCTGGAAGCTTGTCATCGAGAGGCTCTGGTTTTAGCCACTCGAGTAGCTCAAGGAGCGCGGGAGGGGCAGATTCCCATGAAGCAAAGGCCGAGTTACATCCCAAAAACGCAACTGTTAATGAGTCACATTCAGGGGAAGCTGCTGTGTGTGTTACATCTTCTGCACCATGTGAAGATACAACTTCCAGAAAGAAGCCGAGGCTAAACTGGGGAGAGGGACTTGCAAAGTATGAGAAGAAAAAGGTTGAAGTGCCAGATGGAAGTGCTAACAAAGATGGACCTGTCTTGTCTAATGGTAGTATTGAACCTTGTGCTTTCCCCGGTTCCAGCTTAGTAGATAAAAGCCCAAAAGTTACAGGATTCTCAGACTGTGCATGTGCATCTCCTGCAACTCCATCTTCGGTTGCCTGCAGTTCCTCCCCAGGTGTGGATGATAAGTTATTTGGAAAACCTGCAAATGTAGACAATGATGTTAGTAATTTGACTTGTTCTCCTGTTCCTGGATCCCAAGACCATTTTCAGAGGTTTTCTTTTAATTTAGAGAAATTGGATATTGAATCCTTGAATAGTCTGAATTCTTCAATTATTGAGTTGATACAATCTGATGATACAAGTTATGTGAATTCTGGTCCAATGAGGTCCACTGCAATGAATAAGTTACTGATATGGAAAGCCGACATTTCAAAGGTATTGGAGACAACCGAATCTGAAATTGATTCACTTGAAAATGAACTGAAATCTCTAAGATCTGCATCTGGGGATAGAGGTTCATATCCAGCTGTTTTGGGCTCACAGATGGTTGGCAACAATGAAAATCCTTTTGAAGTACCTGTTGGTGTCTCTGATGAAGTTACTCGGCCAGAACCTTTGAAAATTCTTTCTTCTGACGACCCTGATGCTGAGAAATTGCCCCTTTTAACCAACTTAAATAGTATTCATGAGAATGGAAAGGAAGAGGACATTGATAGTCCTGGTTCAGCAACATCTAAATTAAGTGAGCCTCCGCCTTTGGTTAAAGCAGTTTCGTCAAGTGATACAAGGAGATATGATACCTTCTTGGAGGATGCCAATGCTGGTCAGTCTAATGGCATGAAATGCTTAATTCCCTGTACTACAAGGAAGTATCCTAGTAACTCTGCTTGCAGTGATGTCAATGCGGCTTCGGAAGTGCCAGATAGCATTATTACTGCCTCTGGTGCAAGCTTACGTTCTAGCACTGAGGATAGTTTATATAAGAAAATTATTTCTTCCAACAGAGAATTGGCAAAAAGTGCATGTGGAGTATTTGCTAAGTTATTGCCCGACGGATATACTAAAATTGATAAGGTAGGGGCCAGCAGTGACGTGTGCTCTCAGACATCCATTACGGAGAAGTTTGCTGAGAAAAAGCAGTTTGCAAGATTTAAAGAGAGAGTTATCACACTTAAGTTCAAAGCCCTGCATCACCTGTGGAAGGAAGATATGCGCCTACTGTCTATAAAGAAATGCCGGCCAAAATATCACAAGAAACATGAACTAAGTGTGCGGTCTACCTTTAATGGTAATCAGAAGAACCGGTTCTCCATTCGATCTCGTTTTCCCTTACCTGCAGGAAATCATCTGAGCCTGGTTCCAACAGCCGAGGTAATTAATTTTACAAGAAAACTGCTCTCAGAACCTCAAGTTAAAATTCACAGGGATGCCCTGAAGATGCCAGCATTAGTCTTGGATGAGAAGATCCCAAAGTTCATATCTAGTAATGGGCTTGTCGAAGATCCATTGGCTATTGAGAAGGAAAAGGCTTTGATTAATCCTTGGACATCAGAAGAGAGAGAAATTTTCCTTGAAAAATTTGCTGTCTTTGGAAAAGATTTTCGGAAGATCGCTTCTTTCCTTGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCGGATTGTTTTGAAAAACTTAAGAAGCAGCAGAAGTTAGGGAAGTCATTTTTAGCCAAAACTGACTTGGTAGCATCGGGTAAAAAATGGAACCATGAAGCGAATACTGCTTCACTTGACATTTTGAGTGCTGCTTCAGTGATGGCTGATGGCTTTGCATGTAACAAGAAAATGCGTCCTGGGAACTTCCTTATGGGTGGATATGTTAATGTGAAAGCCTCAAGGGTTGATGATAGCATCAGAGAAAGATCAAGCAGCTTTGACATTCTTGGGGATGAGAGGGAGACTTTTGCTGATGTAATGGCTTCATCCGAGGCCATGAGTTTCTGTGGGACAAGTTCAGTTGAACCTGTAGAAGGTAGCCGAGATAGTAGGTTGATGCCTGATACTGCTGAGAATGTTGATGACGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCTACTGATTGGACAGATGATGAAAAGGCAGCTTTTATACAAGCTGTATCATCTTTTGGTAGGGATTTTGTGAAGTTAGCGCGATGCATTGGAACAAGGTCACCAGAACAATGCAAAGTTTTTTTCAGCAAGGCTCGAAAATGCCTCGGATTAGATCTCATGCGCCCTATGCCTGAAAACGTTGGATCACCAGCAAATGATGGTGCAAATGGCGGGGGTAGCGACACAGATGATGCTTGTGTTGTAGAGACAGGTTCAGTGGTTGGCACTGACAAGTCTGGCACTAAGACAGATGAGGACCTGCCTTCATCTGTCATAAACACCTACCATGATGAATCAGATCCTGTGGAAGTTAGGAACCTGGCAGCTGAATTAAATGAGCCTAAAGAGGAGGATGATACAGTAGTCGATCATGAAGATGCAAACTTGGTTAGCGATGGGGTTGTCTTGTACAATTCTGATAAGTCTGGTTCAGTCAATGGGCAGGCTCCTATAGTTATGACAGAAAGCACAACAGTTGGAAAAGACAAAGCCATTAAATTCGGGGGTGCAGACTTGGTGTCTATTTCTGCCCTCGACACAACTGAACCATGTGAGAGGAGTTTGGCTGGTCAGGATAATGTAGTTACTGAAGTTTCTTCTGGGGTTCTTGGAAGTGGATTGGAGAGGCAAAGTGTTCCTTCAACCCAATGTCCTGATGATAGAGGGGATAAACTGGTGGCTGTTACAGCTGTTGGAATTGAACTGAAAAGCTCGGTTCAGGATTCATGTACTACTACAGTAAATGCTTCAGTCTCATCTGTGGGCAATTCTTGTTCAGGATTGAGTTTTGATACTGAAAGTAAGCATATGGCCCTTGGAAAGCCTGTATCTGCATTATATGTCGAGGATCTTCATGCAACTGCAAATTCATTGTCACAAAATACTTCTGTTTCAGCCGCCGTTCAATGCGAGAAAACAGCTACTCAGGATCAACTGTCCTGTACTACTGAGACTCCAGGTGGGAGAAATTTGCAGTGTCATAATCCCATCAGCAATGGTGACCATCAGCTTCCTGTGCCTGGGAATCGTGTGGATCGTGCCAACAGCATCCTCCATGGTTATCCTTTGCAAATGGCCATTAAGAAAGAAGTGAATGGAGATATAAAATGCAGCAGTTCAGCAAACGAGTTGCCCCTTCTATCCCGAAAAGATGAACAAGATGATCATTTCAAAGCAAGGTTAAGCTATTCGTCAGATTCGGAAAAAACATCCAGAAATGGTGATGTGAAATTGTTTGGGAAGATATTAACCAATCCTTCATCCACACAGAAACCTAATTTGACCACCAAGTCATGTGAAGAAAATGGCATCCATCATCCCAAATCTAGCAGGCTTTCGAGTTTGAAATATGCTGATGGAAATTTCAAGATGTTGAAGTTTGAACGAGATGACTGCAGTGAGTATCTTGGCCTTGAAAATGTCCCCTTGCGGAGCTATGGTTACTGGGATGGGAACCGAATACAGACTGGTCTCACATCATTGCCTGATTCTGCCATCCTGCTAGCAAAGTATCCGGCTGCCTTCAGTAATTATCCGTCTTCTTCAGCCAAATTGGAGCAGCAGTCGTTCCATGCATTTGGTAAGAATAATGAAAGGCACCTGAGTGGATCTCCTGCTTTTACAGCTAGGGACATGAATGGCAGTAATGCTGTGATTGATTATCAGATGCTTAGAAGTAGGGATGGTTCTGTGGTTGATGTAAAGCACTGCCAAGACGTGTTCTCTGAGATGCCACGGAGAAATGGGTTCGAAGCAATCTCAAGTTTGCACCAGCAGCAGCAGGGCAGAGGAGTGGTGGGAATGAGTAGTGGTGGTGTTGGAGGAACGGGGATTGTGGTTGGATCATGCAGCGGTGTCACGGATCCTGTGGCAGCCATAAAAATGCATTACCCCAATTCTGACAAGTATGGTGGTCAAACTGGGAATAATATCAGCAGCAGAGAAGATGAATCTTGGGCTGGGGGGAAAGGGGACTTAGGGAGGTAG 5001 0.4417 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFHRWGSAEFRRPPGHGKQGGWHVFSEDSGHGYGISRSSSEKMLDEDCRPSVSRGDGKYGRGSRENRGPFGQRDWRGQSWETTNGSMNLPRRPPDVNNDHRSVDDNLTYSAHPHSDFVNTWDPHHLKDQHDKIGGANGFGTGARSDRENSLASIDWKPLKWTRSGSLSSRGSGFSHSSSSRSAGGADSHEAKAELHPKNATVNESHSGEAAVCVTSSAPCEDTTSRKKPRLNWGEGLAKYEKKKVEVPDGSANKDGPVLSNGSIEPCAFPGSSLVDKSPKVTGFSDCACASPATPSSVACSSSPGVDDKLFGKPANVDNDVSNLTCSPVPGSQDHFQRFSFNLEKLDIESLNSLNSSIIELIQSDDTSYVNSGPMRSTAMNKLLIWKADISKVLETTESEIDSLENELKSLRSASGDRGSYPAVLGSQMVGNNENPFEVPVGVSDEVTRPEPLKILSSDDPDAEKLPLLTNLNSIHENGKEEDIDSPGSATSKLSEPPPLVKAVSSSDTRRYDTFLEDANAGQSNGMKCLIPCTTRKYPSNSACSDVNAASEVPDSIITASGASLRSSTEDSLYKKIISSNRELAKSACGVFAKLLPDGYTKIDKVGASSDVCSQTSITEKFAEKKQFARFKERVITLKFKALHHLWKEDMRLLSIKKCRPKYHKKHELSVRSTFNGNQKNRFSIRSRFPLPAGNHLSLVPTAEVINFTRKLLSEPQVKIHRDALKMPALVLDEKIPKFISSNGLVEDPLAIEKEKALINPWTSEEREIFLEKFAVFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQQKLGKSFLAKTDLVASGKKWNHEANTASLDILSAASVMADGFACNKKMRPGNFLMGGYVNVKASRVDDSIRERSSSFDILGDERETFADVMASSEAMSFCGTSSVEPVEGSRDSRLMPDTAENVDDETCSDESCGEMDPTDWTDDEKAAFIQAVSSFGRDFVKLARCIGTRSPEQCKVFFSKARKCLGLDLMRPMPENVGSPANDGANGGGSDTDDACVVETGSVVGTDKSGTKTDEDLPSSVINTYHDESDPVEVRNLAAELNEPKEEDDTVVDHEDANLVSDGVVLYNSDKSGSVNGQAPIVMTESTTVGKDKAIKFGGADLVSISALDTTEPCERSLAGQDNVVTEVSSGVLGSGLERQSVPSTQCPDDRGDKLVAVTAVGIELKSSVQDSCTTTVNASVSSVGNSCSGLSFDTESKHMALGKPVSALYVEDLHATANSLSQNTSVSAAVQCEKTATQDQLSCTTETPGGRNLQCHNPISNGDHQLPVPGNRVDRANSILHGYPLQMAIKKEVNGDIKCSSSANELPLLSRKDEQDDHFKARLSYSSDSEKTSRNGDVKLFGKILTNPSSTQKPNLTTKSCEENGIHHPKSSRLSSLKYADGNFKMLKFERDDCSEYLGLENVPLRSYGYWDGNRIQTGLTSLPDSAILLAKYPAAFSNYPSSSAKLEQQSFHAFGKNNERHLSGSPAFTARDMNGSNAVIDYQMLRSRDGSVVDVKHCQDVFSEMPRRNGFEAISSLHQQQQGRGVVGMSSGGVGGTGIVVGSCSGVTDPVAAIKMHYPNSDKYGGQTGNNISSREDESWAGGKGDLGR* 1667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3340 1666 MobiDBLite consensus disorder prediction 200 223 - -
Amo19g3340 1666 SMART sant 796 844 IPR001005 -
Amo19g3340 1666 SMART sant 991 1039 IPR001005 -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 114 129 - -
Amo19g3340 1666 ProSiteProfiles SANT domain profile. 993 1041 IPR017884 -
Amo19g3340 1666 SUPERFAMILY Homeodomain-like 992 1041 IPR009057 -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 1640 1654 - -
Amo19g3340 1666 Coils Coil 425 452 - -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 167 188 - -
Amo19g3340 1666 ProSiteProfiles SANT domain profile. 795 846 IPR017884 -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 512 545 - -
Amo19g3340 1666 Gene3D - 962 1047 - -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 977 992 - -
Amo19g3340 1666 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1637 - -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 78 109 - -
Amo19g3340 1666 Pfam Myb-like DNA-binding domain 799 840 IPR001005 -
Amo19g3340 1666 Pfam Myb-like DNA-binding domain 994 1034 IPR001005 -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 1 31 - -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 8 31 - -
Amo19g3340 1666 Gene3D - 776 848 - -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 1636 1666 - -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 961 995 - -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 200 230 - -
Amo19g3340 1666 MobiDBLite consensus disorder prediction 45 136 - -
Amo19g3340 1666 CDD SANT 995 1033 IPR001005 -
Amo19g3340 1666 SUPERFAMILY Homeodomain-like 783 843 IPR009057 -
Amo19g3340 1666 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3340 Amo-Chr19 146073030 146081587 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo19g3340 Myb_DNA-binding 1.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3340 - - adu:107467909 3233.35