Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3335 ATGGACATGATTCATCAACTCCGGTATCTAGAAATGCAACCACATATTGTGGCACAGAAATTGTCTCTTGACTGGGAATGTAAATCTGACCGCTTGCATCTGGAGGCAGGACAAAGTAGCACAATTACAGGAACATATGCAGGACAATTCATAACTGAAGGGTTTTTGAAGCTAAATATAAAGAAATGGTTAAGATCATTGATTACTAGAAGTGGTGCTATTGTTCCAACAATAATAGCTGCTATAGTTTTTAATACATCAAAGAGTTCATTGGATGCTATGAATGAATGGCTCAATGTGGTTCAGTCAATTCAAATTCCTTTTGCACTCATTCCACTTCTTACATTGGTGTCTAAAGAAGAGGTCATG 369 0.3713 MDMIHQLRYLEMQPHIVAQKLSLDWECKSDRLHLEAGQSSTITGTYAGQFITEGFLKLNIKKWLRSLITRSGAIVPTIIAAIVFNTSKSSLDAMNEWLNVVQSIQIPFALIPLLTLVSKEEVM 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3335 123 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 34 123 - -
Amo19g3335 123 Pfam Natural resistance-associated macrophage protein 34 123 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo19g3335 123 PRINTS Natural resistance-associated macrophage protein signature 99 118 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo19g3335 123 PRINTS Natural resistance-associated macrophage protein signature 65 82 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo19g3335 123 PRINTS Natural resistance-associated macrophage protein signature 37 56 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo19g3335 123 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 34 123 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3335 Amo-Chr19 146028894 146029738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3335 34 123 Inorganic Solute Cotransporters AT1G47240 77.778 1.22e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3335 K21398 - gmx:100801411 157.532