Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3313 AAGCTAAGATCATCCTCTTCATCGCCTGAGCTTCAAACTGCTACTGCTGATTCCTTCTTAGATCATCCTCTTCATCACGGCTTTTGCCCCAAGAACAGCATGCGAGTTTTGATTGATAAGTCTTTGGTGAAGATTGAAGATGATAGAGTGATGTTACATGATTTGATTCAAGATATGGGTAGAGAAATCGTTCGACAAGAGTCTGAAGAGCCTCGAGGGCGTAGCAGGATTTGGAACTTTGAGGATGCAAAACGTGTTTTGGAACAAGACAAGCAGGGTAGCCATAAAATTGAAATTATCAAGCTAGCATTCCCCAAAGCTGATGAAAAACTTAATTGGGATGGTGTAGCATTCATGAAGATGAATAATCTCAGAACAATTGTTATTAATAAAGGTGACTTTTCAGACAGTCCCAAACATCTTTCAAATAGTTTGAAAGTGCTTAAATGGAGAGGATATCCTTCACAAATTTTCCCATTTGATTTTTATCCAAAGGAAATAGCCATATTGTGGTTACCAGATAGTTCCATATCATCACTCATTAGTTTCTTTCAAAAGCAAAAGGCAAGTACAATACAAGAAAAGTTCATAAATTTTAGAGTTTTGAATTTCAGCAATTGCCAGCACCTAAAACAAATACCTGATTTATCTGTTGCCCCACATTTGGAAGAATTGTCTTTCTGTTGGTGTAAGAACTTAACTGAAGTTCATAAATCAGTTGGGTTGCTAAATAAACTTAGAATGTTGGATGCAAAGGGTTGTTGCAAGCTTAGGAGTTTTCCAGACCTTATGTTGCCTGCTCTCCAGCAACTCCGCGTTTCGTCTTGTTCAAGTCTTGAGAGTTTTCCAGAAATATTAGGGAAGATGGAAAGTTTAACAAAACTTGAGTTAGAATACACTCCAATAAAAGAATTCCCACCTTCAATTCGTTATATTACTAGGCTTGAAAGATTAGAATTGTGGCACTCTAAGATTGTTCTGTTGCCAAGTAGCATTTTTCTGATGAAAGAGCTTAAGTGCTTGAGAATTCGAAACTGTGATGGTTTGCTGTTACATTCACAAGAGAAAGTTGAGGAGCAAATAAGCTCAGTTGTGTTTTCCAATCAGCAACACTTTGATTTCAGAAACTGCAATGTATCAAATGAGTTTCTTCAAAGGAGTGTTCCTTGGTTAGTCAATGTGAAAGAGCTGAATCTATCATCCAACAGTTTCACAATTCTTCCTGCATGCATTGAAGGATGTACCTTCTTGAAGGTACTTATTTTGGATTATTGTGGGAATCTTCGAGAAGTCGGAGGGATTCCACCAAACATTGAAAAATTCTCTGCAAGAAGATGCATATTCTTAAAATTCTCTGTATGTGTTATTACCTGGAGCTGGAGGCGATGA 1389 0.3737 KLRSSSSSPELQTATADSFLDHPLHHGFCPKNSMRVLIDKSLVKIEDDRVMLHDLIQDMGREIVRQESEEPRGRSRIWNFEDAKRVLEQDKQGSHKIEIIKLAFPKADEKLNWDGVAFMKMNNLRTIVINKGDFSDSPKHLSNSLKVLKWRGYPSQIFPFDFYPKEIAILWLPDSSISSLISFFQKQKASTIQEKFINFRVLNFSNCQHLKQIPDLSVAPHLEELSFCWCKNLTEVHKSVGLLNKLRMLDAKGCCKLRSFPDLMLPALQQLRVSSCSSLESFPEILGKMESLTKLELEYTPIKEFPPSIRYITRLERLELWHSKIVLLPSSIFLMKELKCLRIRNCDGLLLHSQEKVEEQISSVVFSNQQHFDFRNCNVSNEFLQRSVPWLVNVKELNLSSNSFTILPACIEGCTFLKVLILDYCGNLREVGGIPPNIEKFSARRCIFLKFSVCVITWSWRR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3313 462 SUPERFAMILY "Winged helix" DNA-binding domain 25 87 IPR036390 -
Amo19g3313 462 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 452 IPR044974 GO:0006952
Amo19g3313 462 Gene3D Ribonuclease Inhibitor 280 456 IPR032675 -
Amo19g3313 462 Gene3D Ribonuclease Inhibitor 108 279 IPR032675 -
Amo19g3313 462 PANTHER NB-ARC DOMAIN PROTEIN 24 452 - -
Amo19g3313 462 SUPERFAMILY L domain-like 113 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3313 Amo-Chr19 145584060 145585715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3313 27 346 WRKY Transcription Factor Family AT4G12020 33.434 7.90e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3313 - - aip:107641428 823.157