Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3296 ATGTGGATTGGATACTGTTTCTTATTCCAAAATGATGAAGAGTCATTATCATCATCATGTTCATATGTACCAAAAGATGTCCCAAAAGGGCACCTAGTTGTGTATGTAGGTGAAGATTGCAAGAGATTTGTGATCAAGGTAGGTACACTCAACAATCCCCTCATTAAGGCATTGCTGGATCATGCTGAGGACGTGTTTGGATTCGATAATAATATGCTTCGCATTCCTTGCAATGAGACCATTTTCCTAAACATTCTTCACAATGCTACTACTCTTGAAGATGACCAACATCATAATAAGACCCTCTTACATTGTTTCTAG 321 0.3801 MWIGYCFLFQNDEESLSSSCSYVPKDVPKGHLVVYVGEDCKRFVIKVGTLNNPLIKALLDHAEDVFGFDNNMLRIPCNETIFLNILHNATTLEDDQHHNKTLLHCF* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3296 106 PANTHER SMALL AUXIN-UP RNA-RELATED 16 106 - -
Amo19g3296 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 106 IPR003676 GO:0009733
Amo19g3296 106 Pfam Auxin responsive protein 17 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3296 Amo-Chr19 144755666 144755986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3296 26 100 Calmodulin-binding Proteins AT4G34750 39.474 6.26e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3296 - K14488 adu:107467907 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3296 19 144755666 144755986 Amo19g3296 19 144755666 144755986 ECH