Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3267 ATGTGCAAGTCCAAGAAGAGCACCAACGCCGTACAACCAATGAACAGATTCAGAAACAAAAGCAGAACCCAACCTCAACGATCAACCTCCACTTCTTCTCCATCAGCACCACCACCCCTAAACACTAACTACCCTTCATCCTCCTCCGAAGTCGCCATCACCGAATCAACAAGTTACGTTTTCAACCACAGAGATAACAACGATTGGTCCAAATCTTATTCCATTTCAAGCAGCATCGCCTCCCTCTCCAGCCTCAAAAACACTCTCCCTGAGAACCCTCACATCTACGACATCTCCGAGATCGCTGCCGCAACCGCCAATTTCACCTCCGAATCCCACCGCCGCCTTTCCAATTCTTCGTGGCGATGCTCCCTTCGGGACAGAGATGTTGTTGTTTTTCAGCGCAAGTTTCGAAGCCTCATGGACATCCCGGAGCTCCGCCACCGTCTCGCGTTGATCTGCCGGAGCCACCACAGTAGTCTTGTCAAGCTCCTTGGTGCTTCCGTCTCCGGCAATTACATCTATCTGGTGTATGAATTTGTTCCCGGAGCCAGCCTCGCCGATTGCCTACGCAGCCGCCGGAACCCTAGCTTCACGAACTTGCCGACGTGGATTTCGAGGATGCAGATCGCATCCGATATCGCGCACGGACTCGATTATGTTCACAATTTCTCCGGCTCCGATTCCGGTGCCTGTGCTGGATCAGGATTCGTACATAACCACATCAAGAGCTCCAGCATCGTGGTGGCGGAGGCGGAGGACGGTGTCCTCCGAGGCAAGATCTGCCACTTCGGGACCTCTGATCTCTGCGGCGAGGCCGTTGATGGCGGCTCTGACGGCTCTATCGAGAAATTGCGGAGGTCCCGCAGCCGAACGGTGAAGTTTGAGGGGACGAGGGGGTACATGGCACCGGAATTTCAGATCACCGGCGTTGCGACGCAGAAGACTGACGTGTACGCGTTCGGAGTGGTGGTTCTGGAGCTGCTGAGCGGCGATGAGGCGTTGAGGTTCGAATTCGACGGCGATGACGGCGAGTCTTATCGGAGGGTGAGTGTGGTGGATTCGGCGAGGGTGACGGCGAAGGAGCACGGCGGGGCGAGGAAGTGGGTAGATAAGAGGCTCAGGGATTCGTTTCCTGTTGACGTGGCAGAGAAGATGATTCGGGTCGGGCTAGAATGTGTTGGGGAGGATCCGAATGAAAGACCCGATATGGGTCGGGTCGCAGTTGAAGTTTCCAAGTTGTATTTGGAATCACAGAAGTGGGTTGAGAAAATGGGAACCGATATTGACTTTACGGTCTCATTGGCGCCTCGGTGA 1317 0.5475 MCKSKKSTNAVQPMNRFRNKSRTQPQRSTSTSSPSAPPPLNTNYPSSSSEVAITESTSYVFNHRDNNDWSKSYSISSSIASLSSLKNTLPENPHIYDISEIAAATANFTSESHRRLSNSSWRCSLRDRDVVVFQRKFRSLMDIPELRHRLALICRSHHSSLVKLLGASVSGNYIYLVYEFVPGASLADCLRSRRNPSFTNLPTWISRMQIASDIAHGLDYVHNFSGSDSGACAGSGFVHNHIKSSSIVVAEAEDGVLRGKICHFGTSDLCGEAVDGGSDGSIEKLRRSRSRTVKFEGTRGYMAPEFQITGVATQKTDVYAFGVVVLELLSGDEALRFEFDGDDGESYRRVSVVDSARVTAKEHGGARKWVDKRLRDSFPVDVAEKMIRVGLECVGEDPNERPDMGRVAVEVSKLYLESQKWVEKMGTDIDFTVSLAPR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3267 438 SUPERFAMILY Protein kinase-like (PK-like) 136 411 IPR011009 -
Amo19g3267 438 PANTHER OS09G0572100 PROTEIN 1 438 - -
Amo19g3267 438 Pfam Protein kinase domain 150 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3267 438 PANTHER OS09G0572100 PROTEIN 1 438 - -
Amo19g3267 438 MobiDBLite consensus disorder prediction 1 49 - -
Amo19g3267 438 Gene3D Phosphorylase Kinase; domain 1 69 180 - -
Amo19g3267 438 Gene3D Transferase(Phosphotransferase) domain 1 182 433 - -
Amo19g3267 438 ProSiteProfiles Protein kinase domain profile. 110 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3267 Amo-Chr19 143990111 143991808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3267 91 421 Receptor kinase-like Gene Family AT1G51940 31.657 4.18e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo19g3267 Pkinase 6.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3267 - - mtr:MTR_1g094730 556.214