Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3261 ATGATGAGAAAGTGGAGCAGCTCAAAGCATCTGCTATGGCTGTTTCTTTGGTTACCCTTTGTGGTTCAATGCCAAGAAGTGAATGACTATGACCAAATTGATAACCCTTCTGTTCTTCCACTTGTTACTCAGCTTGTCTATAGTAGACTTTCCAATTTGACTTCACTTCTCAGCCAGGAAATTACCACTCACTCCACTTTCTGTGTCAAAGATCCGGATGCTGATTGGAACCAAGCATTTAATTTCTCATCAGATTTGAGTTTCCTGGCTTCTTGCATTAAGAAGACTAAAGGAGATGTCACAAGGCGTTTGTGTACAGCAGCAGAGGTGAAGTTTTACCTAAGCAGTTTGTTGGAGAGATCTACAAGTKCCAATTATTTGAAGCCTAACAAGAACTGCAATTTAACTTCATGGTTCGCCGGTTGCGAGCCCGGTTGGGCCTGCAGTGCTCCTTCATCCCAGAAGGTTGACCTTAGAAATTCAAAGGAGATTCCTGCAAGAACTTCTAACTGCCAACCTTGTTGTGAAGGATTTTTCTGCCCTCATGGTATCACTTGCATGATCCCCTGCCCTTTAGGTTCCTACTGCCCTCTTGCTAAACTAAACAAAGCAACCGGCGTATGCGAACCATATCTTTATCAACTGCCTCCAATGCAGCCAAACCATAGCTGTGGAGGTGCAAATGTATGGGCTGATGTTAGTAGCAGCAGTGAGATGTTCTGCTCAGCAGGATCCTATTGTCCAACAACAACAAAGACAGTTCCTTGTAGTAGTGGGCATTACTGCAGGATGGGTTCCACTTCTGAGAAAAGATGCTTCAGATTGACTTCTTGCAGCTCAAACACTGCGACGCAAAATATGCATGCATATGGAATCATGCTCATTGCTGCATTGAGTACTTTGCTGCTCATAATTTACAACTGTTCTGATCAAGTTCTCACTACTAAGGAAAGGAGAATGGCCAAATCTAGAGAAGCAGCTGCTAGAAATGCAAGAAGCACTGCCACTGCGCGCCAAAGATGGAAATTTGCAAAAGATGCTGCTAAGAAAGGTGCAATCGGGCTACAAGCTCAACTTTCAAGAAAATTCTCGCGTAGGAGGGAAGAAACAACTCATGAAACAGTTATAATTTTGGATCAAGCAACTTCTGAAACAGATGTTGAATTGTTAGAACACTCACAACCTACTACAAGTTCATCTGCAAAGTTGAATGAAAAGGGTAAAGAATCCAGTGGTTTTAAGCAGATCATACATGAAATTGAAGATGACATTCATGTTGAGGCCAACTTCAATGTGAAAATGGAAGCTAGAACTAAAAATGTACCAAAAGGAAAACAATTGCATACTCATAGCCAAATATTTAACTATGCATATGCTCAGCTTGAAAAGGAGAAGGCTCAGCAGCATGAAAACAAGGCCCTTACCTTCTCAGGAGTGGTTAAAATGGCTACCAACATTGAAAAAAGAAAGAGGCCTTTGATTGAGATTTCTTTCAAAGACTTGACTCTTACATTGAAAGCTCAAAACAAGCCTATATTGAGATGTGTTACCGGGAAAATTAAACCCGGCCGAATCACGGCTGTCATGGGACCATCAGGGGCTGGCAAGACAACATTTTTGTCAGCTCTAGCTGGAAAGGCCTTTGGATGCTTCGCGAGCGGTTCAATTCTTATAAATGGAAGGAATGAATCAATCCACTCCTTCAAGAAAATTATTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACTTGACAGTGGAAGAGAATCTCTGGTTCAGTGCACAATGCAGGTTATCAGCTGACTTGTCAAAACCAGAAAAAGTTCTGGTTCTTGAAAGAGTTATTGAATTCTTGGGGCTTCAGTCTGTGAGGAATTCCTTGGTTGGAACKGTGGAAAAGCGAGGGATCTCTGGCGGCCAAAGGAAGCGTGTAAATGTWGGATTAGAAATGGTTATGGAACCTTCACTTCTGATCTTGGATGAACCCACTTCTGGTTTGGACAGTGCATCATCTCAGCTTCTTTTAAGAGCTCTAAGACGCGAAGCGCTTGAGGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCATTGTTCAAGATGTTTGATGACTTGATACTTCTGGGAAAAGGTGGACTTACTGTCTATCATGGACCTGCCAAGAGAGTTGAAGAATACTTTYTAGGCCTGGGGATAGATATACCGGAGCGAATCAATCCTCCGGATTACTTCATYGACATCTTGGAGGGWATAGTAAAACCTGGTGGTAGTTCAGGAGTGAGGTATAAAGAGCTACCAGTTAGATGGATGCTTCATAATGGATATCCAATACCTCATGATATGCAGCAGAGCGCCGARCAGTACGACTCRTCCATRAGCATAAATTCAGCTATAGAGGCCAATGGATATGATCATGAGGACAAAACCTTTGCTGGAGATCTGTGGCATGATGTGAGAAATAATGTGGAACTGCAGGGGGAGAAGATCAAACTCAATTTCTTGAAATCCAAGGATTTATCCAACCGAAGAACACCCGGCATATTCAAGCAGTATAAGTACTTTCTTATCAGGGTTGGTAAGCAGAGATTAAGGGAAGCTAGGATCCAAGCCATAGATTATCTGATATTGTTACTTGCTGGAGCATGCTTAGGAACTCTTACCAAATCAAGTGATCAAACGTTTGGTGCAGCTGGATACACCTATACAGTGATTGCAGTATCACTTCTGTGCAAAATTGCTGCCTTAAGATCATTCTCTCTGGACAAGTTACACTACTGGAGGGAGAGTGATTCTGGGATGAGTAGCTTGGCTTATTTTCTCTCAAAAGACACAATTGATCAATTCAATACTGTGATCAAGCCTGTGGTGTACCTTTCAATGTTCTATTTCTTCACCAATCCAAGATCTTCTTTTGCTGATAACTATGTTGTGCTGCTTTGTCTTGTGTATTGTGTTACTGGCATAGCATATGCACTTGCCATAATTTTTGAACCTGGTGCAGCTCAGTTGTGGTCAGTACTACTTCCTGTTGTTTTAACTCTGATTGCAACACAACCAAAAGATAGTAAAATTTTGAAGGGTATAGCAAATTTATGCTACTCTAAATGGGCTTTACAAGCATTTGTAGTTGCAAATGCTGAAAGGTATCAAGGAGTTTGGCTCTTAACTCGTTGTGGTTCACTAATGAAAAGTGGCTATAATCTTCATGATTGGAATTTGTGCATATCAATCCTCATTCTTATGGGAGTAATTGGCAGGGCAACAGCATTTTTCTGTATGGTTACCTTCCAAAAGAAGTAG 3306 0.4159 MMRKWSSSKHLLWLFLWLPFVVQCQEVNDYDQIDNPSVLPLVTQLVYSRLSNLTSLLSQEITTHSTFCVKDPDADWNQAFNFSSDLSFLASCIKKTKGDVTRRLCTAAEVKFYLSSLLERSTSXNYLKPNKNCNLTSWFAGCEPGWACSAPSSQKVDLRNSKEIPARTSNCQPCCEGFFCPHGITCMIPCPLGSYCPLAKLNKATGVCEPYLYQLPPMQPNHSCGGANVWADVSSSSEMFCSAGSYCPTTTKTVPCSSGHYCRMGSTSEKRCFRLTSCSSNTATQNMHAYGIMLIAALSTLLLIIYNCSDQVLTTKERRMAKSREAAARNARSTATARQRWKFAKDAAKKGAIGLQAQLSRKFSRRREETTHETVIILDQATSETDVELLEHSQPTTSSSAKLNEKGKESSGFKQIIHEIEDDIHVEANFNVKMEARTKNVPKGKQLHTHSQIFNYAYAQLEKEKAQQHENKALTFSGVVKMATNIEKRKRPLIEISFKDLTLTLKAQNKPILRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAFGCFASGSILINGRNESIHSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVLERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLGKGGLTVYHGPAKRVEEYFLGLGIDIPERINPPDYFIDILEGIVKPGGSSGVRYKELPVRWMLHNGYPIPHDMQQSAEQYDSSXSINSAIEANGYDHEDKTFAGDLWHDVRNNVELQGEKIKLNFLKSKDLSNRRTPGIFKQYKYFLIRVGKQRLREARIQAIDYLILLLAGACLGTLTKSSDQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDQFNTVIKPVVYLSMFYFFTNPRSSFADNYVVLLCLVYCVTGIAYALAIIFEPGAAQLWSVLLPVVLTLIATQPKDSKILKGIANLCYSKWALQAFVVANAERYQGVWLLTRCGSLMKSGYNLHDWNLCISILILMGVIGRATAFFCMVTFQKK* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3261 1101 Pfam ABC transporter 515 665 IPR003439 GO:0005524
Amo19g3261 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 495 720 IPR027417 -
Amo19g3261 1101 ProSitePatterns ABC transporters family signature. 637 651 IPR017871 GO:0005524
Amo19g3261 1101 Gene3D - 494 729 IPR027417 -
Amo19g3261 1101 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 1098 - -
Amo19g3261 1101 Pfam ABC-2 type transporter 694 1101 IPR043926 GO:0140359
Amo19g3261 1101 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 32 1098 - -
Amo19g3261 1101 CDD ABCG_EPDR 494 720 - -
Amo19g3261 1101 SMART AAA_5 522 714 IPR003593 -
Amo19g3261 1101 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 496 737 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3261 Amo-Chr19 143868810 143873980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3261 493 715 Calmodulin-binding Proteins AT2G36910 25.620 3.10e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3261 - - lang:109341040 1832.77