Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3208 ATGATGCCCCCAGAGCAAGAAAGCAATATTGCACCCAACATTAGTCCTGCGATTGCGAACCGAACCGGTGATGCTGAACCGGTGGAGGGTTGTCCTGTCACCAATAATAACAAAGTTATACCAAGTTCGGATAATAATAATAATAATAACAATGATGCCATTCATGATGAACACCGTCAACCAACAACAACAGCAGCAGCAGCAACAGCAACAAGATTTTCTATTCTTCAACAATCTTTGCGTCCTATTACYCTAAAATTTGAGGACGTATCATACAGCATAAGCTTCCCAAGGAAAAAGAAGAATGGCTGCTTCTTGCATCAAGAGCCAAAGCACAGAAGGAAAATACTCAGCAGCGTCACCGGCGTCGCTCGTCCCGGGGAGCTAACGGCAATGCTGGGGCCGTCCGGGAGCGGCAAGACAACTCTCTTGACCGCGCTCGCCGGTCGCCTCGWCGGAAAAGTTTCCGGCTCCATAACTTACAACGGCCGCCACGACACCGCCGCCGTGAAGCGCAAGATAGGCTTCGTCTCCCAAGACGACGTACTCTACCCTCACCTGACCGTCCAAGAAACCCTAAATTACGCCGCCATGCTGAGGCTCCCGAAGACGCTCACCAAGGAAGAGAAGCTTCAGCATGCAGACGCGATTATCGCGGAACTCGGCCTCACGCGGTGCCGGAACAGTCCCGTCGGCGGCGGAGTGTCGATTATCCGGGGAATCTCCGGAGGAGAGAGGAAAAGAGTGAGTATAGGTCTTGAGATGCTGATAAACCCTAGTTTGTTGTTTCTCGACGAGCCTACGTCGGGGCTGGACTCCACGACGGCTCAGCTGATCATGTCGGTGGTGCGAGGGCTCGCCCGCGGCGGCCGGACGGTGGTGACGACGATTCACCAGCCGTCGAGCCGGCTTTACAGGATGTTTGATAAGGTGGTGGTGCTTAGCGACGGGCAGCCGATTTATTCCGGTCAATCGGGTCGGGTCATGGAGTATCTTGAATGCATCGGGTATGCGCCAGCTTTCAACTTCGTCAACCCTGCTGATTTCCTTCTTGACCTTGCAAATGGCATAGTTGCTGATGTCAAACATGASGATAATGTTGAACATCAYGAGGATCAAGCATCAATCAAACAGTCCCTAATTTCATCCTACAAGAAGAACTTGTATCCTGCTCTTAAAGAAGAGATTCAACGAAATAATATTGACTCAGTAATATCATCAGGAACACCAAGAAGTTCTGATAATCAATGGAACACAACCTGGTGGGAGCAATTGAAGGTGTTACTTAAGAGGGGTTTACAAGAGAGAAGGCATGAATCCTTTTCTGGCCTTCGAATCTTCCAAGTTTTGTCTGTGTCCATTCTCTCAGGGCTTCTTTGGTGGCATTGTGATCACTCACACATACAAGATCAGGTTGGACTCCTTTTCTTCTTCTCAATTTTCTGGGGATTCTTCCCTCTCTTCAATGCTATCTTTGCATTTCCTCTGGAGAGGCCAATGCTTGTGAAAGAAAGATCATCAGGAATGTACCATCTGTCCTCATACTACGTGGCACGAATGCTYGGAGACTTGCCAATGGAGCTTGTCCTCCCTACAATCTTTGTAAGCATCAGCTACTGGATGGGAGGACTAAAGCCTTCAGTAGTGACATTTGTGCTAACCCTCTTGATCATGCTTTTCAATGTCCTTGTATCCCAAGGAATAGGCCTAGCACTCGGYGCAATCCTCATGGATGTGAAGCAAGCCACGACTCTAGCCTCAGTGACCATGCTGGTGTTTCTCTTGGCYGGYGGCTACTACATTCAACATATGCCSCCCTTCATAGAATGGTTGAAGTATGTCTCCTTCAGTCACTACTGCTATAAGCTCCTTGTAGGAGTTCAGTATCCAGAAAATGATGTGTATGATTGTGGACATGGCTTGCTTTGTAGAGTAAGAGACTTTCCTGCTATAAAGTGTTTGGGGATTGAAAATTTGTGGGAAGATGTTGCAACATTGACTCTGATGTTAATTGGATACAGAGTTGTCGCATATTTAGCTTTGAGGATGGGGCAGCCTCACTGA 2064 0.4811 MMPPEQESNIAPNISPAIANRTGDAEPVEGCPVTNNNKVIPSSDNNNNNNNDAIHDEHRQPTTTAAAATATRFSILQQSLRPITLKFEDVSYSISFPRKKKNGCFLHQEPKHRRKILSSVTGVARPGELTAMLGPSGSGKTTLLTALAGRLXGKVSGSITYNGRHDTAAVKRKIGFVSQDDVLYPHLTVQETLNYAAMLRLPKTLTKEEKLQHADAIIAELGLTRCRNSPVGGGVSIIRGISGGERKRVSIGLEMLINPSLLFLDEPTSGLDSTTAQLIMSVVRGLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGQPIYSGQSGRVMEYLECIGYAPAFNFVNPADFLLDLANGIVADVKHXDNVEHHEDQASIKQSLISSYKKNLYPALKEEIQRNNIDSVISSGTPRSSDNQWNTTWWEQLKVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHCDHSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLVKERSSGMYHLSSYYVARMLGDLPMELVLPTIFVSISYWMGGLKPSVVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQHMPPFIEWLKYVSFSHYCYKLLVGVQYPENDVYDCGHGLLCRVRDFPAIKCLGIENLWEDVATLTLMLIGYRVVAYLALRMGQPH* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3208 687 CDD ABCG_EPDR 82 323 - -
Amo19g3208 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 56 684 - -
Amo19g3208 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 334 IPR027417 -
Amo19g3208 687 Pfam ABC-2 type transporter 423 629 IPR013525 GO:0016020|GO:0140359
Amo19g3208 687 SMART AAA_5 126 318 IPR003593 -
Amo19g3208 687 Pfam ABC-2 type transporter 298 385 IPR043926 GO:0140359
Amo19g3208 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 56 684 - -
Amo19g3208 687 MobiDBLite consensus disorder prediction 1 64 - -
Amo19g3208 687 Pfam ABC transporter 120 269 IPR003439 GO:0005524
Amo19g3208 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 341 IPR003439 GO:0005524
Amo19g3208 687 MobiDBLite consensus disorder prediction 35 50 - -
Amo19g3208 687 ProSitePatterns ABC transporters family signature. 241 255 IPR017871 GO:0005524
Amo19g3208 687 Gene3D - 77 335 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3208 Amo-Chr19 142614889 142619863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3208 115 330 Calmodulin-binding Proteins AT2G36910 24.775 3.32e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3208 K05681 - gmx:100792991 1009.59