Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3181 ATGATTCATCGCTTCTTTAGATTATCTTTGCTTTTGAGATTTTTTGTGCAATGGTCTCCAATGGGTACATACCTGGCAACCATACATAGGCAAGGAGCAGCAGTTTGGGGAGGTTCCACAACATTCAATCGTCTCATGCGATATGCTCATCCCCAAGTTAAACTTATTGATTTTTCACTTGGTGAGAAGTTTTTGGTAACCTATAGTAGGCATGAGCCAAGCAATCCTCGATATGCAAATAGGGTTGTGATAAATATATTCGATGTGAGAACTGGAAAAGTCATGAGAGATTTTAAGGGAAATGCTGATGATTTTGCTATTGGAGATGGGGTGGAGGAAAGGACAAATACATTCTCTCTTGTTGACAAGAAATCCTTAAAGGTTGAAAGTGTAATGTATTTTAGCTGGTCACCAACTGATCCCATCCTTGCACTTTTTGTTCCTGAATTGGGTGGTGGGAACCGGCCAGCTAGACGACCGATTTACCGATTTAGCGACTGA 501 0.4092 MIHRFFRLSLLLRFFVQWSPMGTYLATIHRQGAAVWGGSTTFNRLMRYAHPQVKLIDFSLGEKFLVTYSRHEPSNPRYANRVVINIFDVRTGKVMRDFKGNADDFAIGDGVEERTNTFSLVDKKSLKVESVMYFSWSPTDPILALFVPELGGGNRPARRPIYRFSD* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3181 166 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B 15 109 - -
Amo19g3181 166 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B 114 161 - -
Amo19g3181 166 SUPERFAMILY DPP6 N-terminal domain-like 16 144 - -
Amo19g3181 166 Gene3D - 14 148 IPR015943 GO:0005515
Amo19g3181 166 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 15 109 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Amo19g3181 166 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 114 161 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3181 Amo-Chr19 141946010 141947343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3181 15 158 Eukaryotic Initiation Factors Gene Family AT5G27640 55.747 2.91e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3181 K03253 - aip:107616992 253.062