Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3163 ATGTCTCTTTTAATTTGCTTTGAGTTTAAGATTATAATGACATTTAACCTCTCAGTTCTGAACTTGGTAATTGTGAAGAAGGGTGACAATGATTTACCAGGCCTGACAAACATTGAAAAGCCAAGGATGAGGGTCCAAAGAGAGCCTCCAAAATCCATAAGCTGTTCAACCTTTTCAAGGAAGATGATGTGA 192 0.375 MSLLICFEFKIIMTFNLSVLNLVIVKKGDNDLPGLTNIEKPRMRVQREPPKSISCSTFSRKMM* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3163 63 PANTHER 40S RIBOSOMAL PROTEIN S6 11 47 IPR001377 GO:0003735|GO:0005840|GO:0006412
Amo19g3163 63 PANTHER 40S RIBOSOMAL PROTEIN S6 11 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3163 Amo-Chr19 141263349 141263612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3163 12 44 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 78.788 1.65e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3163 K02991 - han:110909340 58.151