Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3161 ATGCAATATTTTATGAATGATATGAAGGAGTATTATGGGAGTGGAGAGACAAAGAAAGTGTCATGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTCCTCATTGAAAAAGAAGAAGATATTTTGAAGGCCTTAATGCTCGACTTAGGAAAGCATCAAGTTGAAGCTTTTAAAGATGAGATAGAAACTTTGATGAAGTCCTTGAATTTTGCATTGAGTAACTTAAAATATTGGATATCAGGCAAAAAGGCTAAATTGCCACAAATAGCACTGCTTAGTAGTGCAGAAATTGTTCCTGAACCTCTGGGCCTAGTCCTCATTATTTCATCTTGGAATTTCCCCTTTGGTTTATCCTTGGAGCCACTAATAGGAGCAGTAGCAGCTGGAAACACAGTGGTCTTAAAGCCTTCAGAGTTGTCACCAGCATGTTCTTCCATACTTGCCCTTGGACTTCCCAATTTCTTGGACCTCCCAATCATAAGGTCAATCTTCATAGTTATAGCTGCTATTCCTCATCTTGGAAACATTAACTTTGCAAAATCAGAGGAAGAAACTGATTCATCAGTTCTAGAAAATGAAGAGTCCAAGTTGCATCTCCAAATAACCGCAGAACTTCTCATGTGCGATCCTAGTGCTTTGGAAGATGCACTTTGTAAGCGTGTGATGATTACCCCAGAGGAAGTTATTAAAAGAAGTCTTGATCCTCTTGGTGCAACGGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTTGTTTATTTGACTGGTTAGTCCAAAAAATCAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACATTTCAACCAGCATGTGTTTAAGATGGAACAAGAGAGATATACAAAAGAAGGGATTGACTGGAACTACTTAGAATTTGTGGATAATCAAGATGTACTTGATCTAATTGGAAAAGTTTATACATACTTTATGGCTATGCTTCATTTTGCAATATTTATAGCTAGATTTCAATCTGATAGAGCAACATCTAATGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTTGCAAACTGCTTATGTAGTTTGTATTTGA 1206 0.3507 MQYFMNDMKEYYGSGETKKVSWRESQLKGLRRFLIEKEEDILKALMLDLGKHQVEAFKDEIETLMKSLNFALSNLKYWISGKKAKLPQIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSELSPACSSILALGLPNFLDLPIIRSIFIVIAAIPHLGNINFAKSEEETDSSVLENEESKLHLQITAELLMCDPSALEDALCKRVMITPEEVIKRSLDPLGATVSRDGLAKTLYSCLFDWLVQKINVSIGQDPESKCLIGVLDIYGFESFKNNSFEQFCINFTNEKLQQHFNQHVFKMEQERYTKEGIDWNYLEFVDNQDVLDLIGKVYTYFMAMLHFAIFIARFQSDRATSNVIYIYIYIYIYIYIYIYIYIYICLQTAYVVCI* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3161 401 PRINTS Myosin heavy chain signature 327 355 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3161 401 PRINTS Myosin heavy chain signature 274 302 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3161 401 PANTHER MYOSIN 162 359 - -
Amo19g3161 401 ProSiteProfiles Myosin motor domain profile. 160 401 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3161 401 Gene3D - 291 369 - -
Amo19g3161 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 348 IPR027417 -
Amo19g3161 401 Pfam Myosin head (motor domain) 160 353 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3161 401 Gene3D Myosin VI head, motor domain, U50 subdomain 165 290 - -
Amo19g3161 401 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 162 359 - -
Amo19g3161 401 SUPERFAMILY ALDH-like 10 148 IPR016161 GO:0016491
Amo19g3161 401 SMART MYSc_2a 19 396 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo19g3161 401 Pfam Aldehyde dehydrogenase family 19 148 IPR015590 GO:0016491
Amo19g3161 401 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 155 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3161 Amo-Chr19 141180309 141183150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3161 162 360 Myosins gene family AT3G58160 70.854 8.07e-92 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3161 K10357 - ahf:112805813 565.459