Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3156 ATGCAGACCAGCTGTGTTGTGGACGAAAAATTTGTCCCAAAGATGGGAATGATTTTCAAGACCCTAGAAGAATCTAGAAAGTTCTACAAACATTATTCCAAACTTGCTGGTTTTTCCACCAAACTAAGGAACACGACTCGGGATGGAGACAAGATTAAGAATCAACTAATTGTATGCTCTAGAGAGGGGAGGTGGAAATCAAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCAGTCAGAATTTACGTACACATAATGAAGGATGTTGGTCTTTGGATAATTTCCAAAGTTGTTTTGAATCACTCACATCCTTTTTGTCCAGACCAGGCTGAGATGCTCAAACAACACAGGGAGTTTAGCATAGCTGTACGAGGATCGACATATATGGATTCTGGTTTACTTGGATCACCACTTTTAGCCCGGGATGAAAAGCACACAAAGGAGTGA 465 0.4065 MQTSCVVDEKFVPKMGMIFKTLEESRKFYKHYSKLAGFSTKLRNTTRDGDKIKNQLIVCSREGRWKSKISPTLKTNPSAGLNCPVRIYVHIMKDVGLWIISKVVLNHSHPFCPDQAEMLKQHREFSIAVRGSTYMDSGLLGSPLLARDEKHTKE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3156 154 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 124 - -
Amo19g3156 154 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 4 124 - -
Amo19g3156 154 Pfam FAR1 DNA-binding domain 27 112 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3156 Amo-Chr19 140959364 140960773 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g3156 FAR1 6.6e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3156 - - aip:107636690 242.276