Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3148 ATGAACAACAATTCAGTTTCAGAGAACAGTTTCTACATTGACAGTGATGAAGAAGATGAGGAGAATAAGAATTTGAACAAAGTAGAAGGTGGTGGTGGTGATGGTAATGATTCAGATTCTTCAAGTTACACAAATAATGAAAACCTTCCACAGAGAAAACCAAGCTCCTACAACATCTCATGGCCTCAGAGTTACAGGCAGTCAATTGATCTATACAGCAGTGTTCCATCACCAAACATTGGATTTCTAGGGACACCTTCATTGTCAAGACTAAGCAGTTCTTTTCTTTCAACATCTCTAACAAGGAGACACACTCCTGAGGTACTTCCATCAGTTACAAAGCCATTGATTCAGCCGGTGGCCGCCGAGGATGAGGCCGTGCGTCGGCGTAGCTCTCATGCCTTGATTCCTCCAAGGAGGTCTTCTTCTTCCCTTAAGAAGGAATCAAAGGTCTCTCATGAAATTCCAATTTCAAGACATTGTTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGTCCTTTGTGGTGTAGGAATCCTTTCTACACCTTATGCTGCCAAAGAAGGTGGATGGATTGGCCTTTCAATCTTGTTCCTTTTTGCAATTATTTCCTTTTATACCGGGATGCTCTTGCGTTCCTGCTTGGATAGTGAACCTGGAATTGAGACATATCCGGACATTGGCCAAGCCGCTTTTGGAACTACCGGGCGTATCGCCATTTCAATAGTACTGTATGTGGAATTGTATGCATGTTGCATTGAGTATATAATTTTGGAGGGTGACAATTTGTCTTCCTTATTTCCAAGTGCTCACTTGAGTTTGGGAGGAATCGAATTGGATTCACATACTTTGTTTGCGCTCATTACAACCTTGGCCGTTCTACCAACTGTTATGCTCCGGGACCTAAGCATTCTCAGTTACATCTCAGCCGGTGGAGTTGTTGCGTCGGTTTTGGTGGTTATCTGCTTGTTCTGGATCGGCATTGAGGATGTCGGCTTTCAAAGCAAAGGGACAACACTCAATCTTGCAACTTTTCCTGTTGCTGTTGGTCTCTATGGATACTGCTACTCAGGACATGCAGTGTTTCCAAACATTTATACATCCATGGCAAATCCAAATCAGTTCCCTGCAGTGCTCTTAACATGTTTTGGTATCTGTACCGCACTGTATGCCGGAGCGGCTGTCATGGGATACACAATGTTTGGAGAAGCTATTCTGTCTCAGTTCACTCTTAACATGCCCAAAGAAATGGTTGCTACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCATTGACTATATCTCCAGTAGCAATGAGTCTAGAAGAGTTGATACCATCAAGCCATGCCAAGTCTTTCCTATATTCCATCTTCATCAGAACAGGGCTAGTAGTTTCAACCCTCATTATTGGCCTTTCTGTTCCTTTTTTCGGTCTTGTAATGTCATTGATTGGATCTTCACTCACAATGCTTGTTACTTTGATACTTCCCTGTGCTTGTTTCCTACGAATCTTGCGCGGCAAAGTCACGCGATTTCAGTCAGTACTCTGCATTACAATTATCTCAATTGGTGTTGTTTGTGCTGTTTTCGGTACATATTCTGCGCTCGCGGAGATTGTTAAGAGTTTAAGCGGATGA 1653 0.4283 MNNNSVSENSFYIDSDEEDEENKNLNKVEGGGGDGNDSDSSSYTNNENLPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPEVLPSVTKPLIQPVAAEDEAVRRRSSHALIPPRRSSSSLKKESKVSHEIPISRHCSFGQAVLNGINVLCGVGILSTPYAAKEGGWIGLSILFLFAIISFYTGMLLRSCLDSEPGIETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPSAHLSLGGIELDSHTLFALITTLAVLPTVMLRDLSILSYISAGGVVASVLVVICLFWIGIEDVGFQSKGTTLNLATFPVAVGLYGYCYSGHAVFPNIYTSMANPNQFPAVLLTCFGICTALYAGAAVMGYTMFGEAILSQFTLNMPKEMVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSSHAKSFLYSIFIRTGLVVSTLIIGLSVPFFGLVMSLIGSSLTMLVTLILPCACFLRILRGKVTRFQSVLCITIISIGVVCAVFGTYSALAEIVKSLSG* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3148 550 MobiDBLite consensus disorder prediction 1 59 - -
Amo19g3148 550 MobiDBLite consensus disorder prediction 128 147 - -
Amo19g3148 550 PANTHER - 30 547 - -
Amo19g3148 550 MobiDBLite consensus disorder prediction 35 59 - -
Amo19g3148 550 Pfam Transmembrane amino acid transporter protein 161 539 IPR013057 -
Amo19g3148 550 PANTHER OS05G0424000 PROTEIN-RELATED 30 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3148 Amo-Chr19 140748350 140753981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3148 3 483 Amino Acid or Auxin Permease AAAP Family AT2G39130 70.226 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3148 K15015 - gmx:100775840 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3148 19 140748350 140753981 Amo19g3148 19 140748350 140753981 ECH