Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3124 ATGAAGCTTGTTGCTGCCACTAAAGTCAGAAGGGCTCAAGAAGCTGTTGTTAATGGAAGACCCTTCTCAGAGACTCTTGTTGAGGTCCTTTACAACATCAACGAGCAGCTCCAAACTGAGGAAATTGATGTCCCACTCACAAAAGTTAGGCCAATGAAGAAGGTAGCACTGGTTGTGTGCACTGGTGATAGAGGTCTTTGTGGTGGTTTCAACAATAACATCATCAAGAAAGCCGAAGAAAGAATTGCTGAATTGAAGGATCTTGGTCTTGACTACACTATCATTAGTGTTGGCAAGAAGGGTAACTCTTACTTCCTCCGTAGGCCTTATATACCAGTTGATCGGTTTTTAGAAGGAGGATCACTCCCAAATGCGAAAGAGACTCAGGCAATTGCTGATGATGCCTTCTCGTTGTTTATCAGTGAAGAGGTTGACAAAGTAGAACTCTTATACACAAAGTTTGTGTCATTGGTGAAATCAGAACCTATGATTCACACCTTACTTCCACTGTCGCCAAGAAACAACTCCAACCATAGGTTTCTTGTAATCTCCATATTGGAACAAAAATGCTAA 573 0.4171 MKLVAATKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEEIDVPLTKVRPMKKVALVVCTGDRGLCGGFNNNIIKKAEERIAELKDLGLDYTIISVGKKGNSYFLRRPYIPVDRFLEGGSLPNAKETQAIADDAFSLFISEEVDKVELLYTKFVSLVKSEPMIHTLLPLSPRNNSNHRFLVISILEQKC* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3124 190 CDD F1-ATPase_gamma 1 187 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo19g3124 190 Gene3D - 4 188 - -
Amo19g3124 190 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 1 176 IPR035968 GO:0015986|GO:0045261|GO:0046933
Amo19g3124 190 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 173 - -
Amo19g3124 190 PRINTS ATP synthase gamma subunit signature 52 71 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo19g3124 190 PRINTS ATP synthase gamma subunit signature 145 162 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo19g3124 190 PANTHER ATP SYNTHASE GAMMA CHAIN 1 173 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo19g3124 190 Pfam ATP synthase 1 175 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3124 Amo-Chr19 140348210 140348782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3124 1 176 Primary Pumps ATPases AT1G15700 66.667 1.16e-81 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3124 K02115 - adu:107486787 324.324