Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3094 ATGGGCGATGGCAAGGTCAATCTCCCCGACATTCTCTTCTCCTCCAAGCCCTCCGATTCCAAAGGACATGTTTGGAGTTGGCTGACATATGCAAAGAAGTGGGCCTTCCTCCGGTCTAAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAGAAAATTATGGAGCTTGAGGAGGAAAAAAGAAAAGTGCAGAAATCTCAAGATGTTCATGGCCAAAAATTGAAAGCACTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAACCAGGTGCAGCTACTAAAGCAAAAGGAGAAGAGCGAAGAAACTGCAAAAAAATTGCAAGCTGAAATACAGTACATCAAGGCTCAAAAGGCACTTGTCCAATTGCAGCATAAAATGAAGCAAGAGGCAGAACAACTTCGACAATGGAAGGCTTCTCGAGAAAAGGAGTTACTTCAGTTTTATTATCTACTTTTGCTTTATAGAGGAGGCAGAATATATTCACAAGCTCAGAAAACTTTTCAAGGTTGCCTATCGTCTTCGAGAACTCAAACCTGGGGAGGCTGTTTTGGATTGGCCTACGAGAAAAAAGTGGCTCTGGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGTTTATTCATCGGGATGTGAAGGCAGCTAATGTATTACTGGATGTGAAGGCAGCTAATGTCACTTCTGTAGCTATATGTCACTAG 735 0.4272 MGDGKVNLPDILFSSKPSDSKGHVWSWLTYAKKWAFLRSKMKRIGIDTEALKEHFGKKIMELEEEKRKVQKSQDVHGQKLKALEAQILDLKKKQENQVQLLKQKEKSEETAKKLQAEIQYIKAQKALVQLQHKMKQEAEQLRQWKASREKELLQFYYLLLLYRGGRIYSQAQKTFQGCLSSSRTQTWGGCFGLAYEKKVALGTARGLEYLHEQCNPKFIHRDVKAANVLLDVKAANVTSVAICH* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3094 244 Pfam Protein tyrosine and serine/threonine kinase 107 232 IPR001245 GO:0004672|GO:0006468
Amo19g3094 244 PANTHER KINESIN-LIKE PROTEIN KIN-4B 69 155 - -
Amo19g3094 244 PANTHER KINESIN-LIKE PROTEIN KIN-4B 38 74 - -
Amo19g3094 244 Coils Coil 52 72 - -
Amo19g3094 244 Coils Coil 80 147 - -
Amo19g3094 244 ProSiteProfiles Protein kinase domain profile. 65 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g3094 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Amo19g3094 244 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 69 155 - -
Amo19g3094 244 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 38 74 - -
Amo19g3094 244 SUPERFAMILY Protein kinase-like (PK-like) 127 232 IPR011009 -
Amo19g3094 244 Gene3D Transferase(Phosphotransferase) domain 1 97 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3094 Amo-Chr19 139504294 139507881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3094 140 231 Receptor kinase-like Gene Family AT1G60800 41.304 1.66e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo19g3094 PK_Tyr_Ser-Thr 1.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3094 - - ahf:112772041 195.667