Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3076 GTCCAAAGTGAATGCAGTAAAGGGCTAGGGAAAGGGGGCTACAATCAATCAACTCAAAGAAAGCAGTGTGAAGTTATGGGTCAAGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAATATGAGCAGGAGGAAGAAAAATATGAGGAAGTTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCGAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGTGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCACAAAATAATTACGGCATTGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGTGGTCGT 513 0.423 VQSECSKGLGKGGYNQSTQRKQCEVMGQEFSHEGVNSEHTSYDQYEQEEEKYEEVDVDYMDEDDTNVEPMFDYHGFDEGDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRVGALKLKNFVCHREGFRPQNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3076 171 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 36 163 - -
Amo19g3076 171 MobiDBLite consensus disorder prediction 1 20 - -
Amo19g3076 171 MobiDBLite consensus disorder prediction 25 53 - -
Amo19g3076 171 Pfam FAR1 DNA-binding domain 96 167 IPR004330 -
Amo19g3076 171 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 36 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3076 Amo-Chr19 139131400 139132403 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g3076 FAR1 1.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3076 - K17604 ahf:112723376 271.937