Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3044 ATGGCCGGATCATCGTGGTTGGTAGACAAAAGTAGAATTGCAACCAAAATAAAGAGTGCATCTGGAGCAAGTGGGAAAGTTTTATGGAAAAGCAATCCTACCAGAACTTGTCCGAATTGTCAACATGTTATTGATAACAGTGATGTGGCACAAGAGTGGCCTGGATTACCAAAAGGTGTGAAATTTGATCCATCTGATCAAGAAATAATATCGCACTTGCTTGCAAAAGTTGGTGCAGCAGGTTCAGAGCCTCACCCTTTCATTGATGAATTTATTGCTACTCTTGAAGTGGATGATGGAATTTGTTATACACATCCTAAACATTTACCAGGTGTCAAGCAAGATGGTAGTGCTACACACTTTTTCCACAGATCAATCAAGGCTTATAATACCGGCAATCGAAAGCGTCGGAAAATAAATGACCAGGACTCTGGCGATGTCCGTTGGCACAAGACTGGAAAAACTAAACCTGTCATCTCGGACGGGGTTCAGAGAGGCTGTAAAAAGATTATGGTTCTATATATGACTTCAGTTAGAGGAGTAAAAGCTGAGAAAACTAACTGGGTTATGCATCAATATCACCTCGGAACAGACGAAGATGAAAAGGAAGGAGAGTATGTTATCTCTAAAGTGTTTTACCAGCAACAAGTTAAGTTTGGTGAAAAAGATGATCATGATGTTCCTGGAACCAATGAAGCAACTGTTGTGAAAGATGATCCAGTCACTTCGGAACCTCCTCATAGTGAAAAGCAATGTTCATATCTCCACATAGGAGAAAAATCACATCAGATTCCTCAGGGTCCTCAGACAGATTGTGTAGAAGACATTCAAGCCGAGTGTGAAGAGATTGTGAAAACTGATGTAGCCATGGCAGATGCTCAAAATAATGAAGGAATGGATAATGTAGAAAATAATGCTGATGGAGAACAAAAATGGTGGGACAGTGAGTCACAGAATTTGTTAGATTCACAACAACTTGTTGAAGCATTGGCCTTGTGTGATGATCTCCTCCATAGCCAGTGTTCCAATAAGGATGATGAAAATGTAGAACACAAGGAGCACTTGAGTCTTTCCATCTATGCTCATCTAGGACCAGAGCATCTGAAGAAAGATCTTGAAGAGTGCCAAAACCTTAATCTTGATCCTGCAAACGTAGAGCTCGAGACACCACCTTCAGAGTTTCGACTAAGTCAGCTGGAATTTGGTTCACAGGATAGCTTTGTTTCCTTGAGCGGTGGCAAGGCAGTCGACTAA 1254 0.4123 MAGSSWLVDKSRIATKIKSASGASGKVLWKSNPTRTCPNCQHVIDNSDVAQEWPGLPKGVKFDPSDQEIISHLLAKVGAAGSEPHPFIDEFIATLEVDDGICYTHPKHLPGVKQDGSATHFFHRSIKAYNTGNRKRRKINDQDSGDVRWHKTGKTKPVISDGVQRGCKKIMVLYMTSVRGVKAEKTNWVMHQYHLGTDEDEKEGEYVISKVFYQQQVKFGEKDDHDVPGTNEATVVKDDPVTSEPPHSEKQCSYLHIGEKSHQIPQGPQTDCVEDIQAECEEIVKTDVAMADAQNNEGMDNVENNADGEQKWWDSESQNLLDSQQLVEALALCDDLLHSQCSNKDDENVEHKEHLSLSIYAHLGPEHLKKDLEECQNLNLDPANVELETPPSEFRLSQLEFGSQDSFVSLSGGKAVD* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3044 417 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 409 - -
Amo19g3044 417 Gene3D NAC domain 65 218 IPR036093 GO:0003677|GO:0006355
Amo19g3044 417 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 409 IPR044799 GO:0003700
Amo19g3044 417 SUPERFAMILY NAC domain 41 214 IPR036093 GO:0003677|GO:0006355
Amo19g3044 417 ProSiteProfiles NAC domain profile. 56 214 IPR003441 GO:0003677|GO:0006355
Amo19g3044 417 MobiDBLite consensus disorder prediction 222 250 - -
Amo19g3044 417 Pfam No apical meristem (NAM) protein 57 195 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3044 Amo-Chr19 138212948 138216847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3044 32 218 NAC Transcription Factor Family AT1G28470 57.513 4.93e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo19g3044 NAM 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3044 - - gmx:100787702 647.506