Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3007 ATGGAGAATGGAAACACGTCATCGTCAGGAATAGCAAGAACGAAATCGGATCAGCTATTGATGATGGAATCGGCGACGGCGGCGAATAGTATTAARTCATCGCCGGAGAGTGGTGGAGGAGGAAACCTGTCTCGGAAATCGAGCAGGAGGATGACGCACATAAGGAAGTCTCGGAGCGCGCAGATGAAGATAGAGGTGGATGAGGTGAGCAGCGGTGCGGCACTTAGCAGAGCGTCAAGTGCGAGCTTGGGGCTGTCTTTCTCCTTCACTGGCTTCACTCTTCCTCCTGATGATGAAATCTCCGACTACAAGCCCTTCAGTGATGATGATGATATCCCGGAAGATATTGAAGCTGGAACTCATAAGCCAAAGTTTCAAATGGATCTTACTCTACCAATATATCTAAAGTTCAGTGATGTGACATATAAGGTAGTGATGAAAGGAATGACAACAAGTGAGGAGAAGGATATACTGAAGGGTATWACTGGTTGTGTGAGTCCAGGGGAAGTTTTGGCATTGATGGGACCCTCAGGAAGTGGAAAAACATCACTGCTGAYTCTTCTTGGAGGAAGAATAACTCATCACCCCACTGTTGGTGGATCTATCACCTACAATGACCAGCCTTATTCTAAGTTCCTCAAGAGTAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCTCATCTAACRGTAAAAGAAACATTGACATATGCAGCCAGACTAAGATTGCCAAATACATTAACTCAGGAGCAAAAGGAACAACGTGCTTTAGATGTCATCTATGAGCTTGGTTTGGAAAGGTGCCAAGACACTATGATAGGAGGATCCTTTGTTCGAGGAGTATCTGGGGGAGAGAGGAAGAGAGTCTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTCTTCTTGATGAACCAACTTCTGGCCTCGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAACACATAGCAGAGGCTGGTAAAACGGTAGTGACAACAATCCATCAACCATCAAGCAGGCTCTTCCATAAATTTGATAAGTTGATCCTTTTAGGAAAAGGGAGCTTGATTTACTTTGGAAAAGCATCTGAAGCTATGTCTTACTTCCAGTACATAGGGTGTTCACCTCTCATCACCATGAACCCAGCAGAGTTTCTACTTGACCTTGCAAATGGTAACATAAATGATGTTTCTGTTCCATCAGAGTTAGAGGATAAAGTTCAAATGGGGAATTTGTCAGAAGCTGAAACTCGCAATGGGAAACCATCACCTGCACTTGTGCAAGAGTATCTAGTGGAGGCGTATGAGACTAGAGTTGCTGAAARAGAAAAGAAAAAGCTACTGGTTCCTATCCCCCTTGATGAAGAACTCAAGTCTAAGGTTCTTTGTTCTAAAAGACAATGGGGAGCAAGTTGGTGTGAGCAATTTTCCATCTTGTTCTTGAGAGGATTCAAAGAAAGGAGGCATGACTATTTCAGCTGGTTGAGAATCACACAAGTTCTATCCACAGCAGTCATCTTAGGATTGCTATGGTGGCAATCAGATGCTAAAAACCCAAAAGGCATGCAAGACCAGGCAGGACTACTTTTCTTRATTGCTGTGTTTTGGGGATTCTTTCCTGTCTTCACTGCAATATTCACATTCCCACAAGAGAGAGCAATGTTAAATAAGGAAAGAGCAACAGATATGTATAGACTAAGTGCATATTTTGTGGCAAGAACTACAAGTGACCTTCCATTAGACCTTATCTTACCAGTGCTTTTCCTCTTAGTTGTTTACTTCATGGCTGGATTGAGACTCAGTGCAGGACCATTCTTGCTTAGCATCCTTACAGTTTTTCTCTGCATAGTTGCAGCTCAGGGACTTGGACTTGCTATTGGGGCAACACTAATGGACTTGAAAAGGGCAACAACATTGGCTTCAGTTACTGTAATGACTTTCATGCTTGCTGGAGGCTTTTTTGTGAAGAGGGTGCCGATATTTATATCYTGGATCCGGTACATATCTTTCAACTACCACACGTACAAACTTCTGCTGAAGGTGCAATATGATGAAGAAGTGACACCAATGATAAATGGAATCAGAATTGATAGTGGCTCAACAGAGGTGGTTGCTCTGATAGCAATGGTTTTTGGTTACCGTCTATTGGCATATRTTTCCTTGCGTTGGATGAATGTTTCATAA 2196 0.4267 MENGNTSSSGIARTKSDQLLMMESATAANSIKSSPESGGGGNLSRKSSRRMTHIRKSRSAQMKIEVDEVSSGAALSRASSASLGLSFSFTGFTLPPDDEISDYKPFSDDDDIPEDIEAGTHKPKFQMDLTLPIYLKFSDVTYKVVMKGMTTSEEKDILKGITGCVSPGEVLALMGPSGSGKTSLLXLLGGRITHHPTVGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTQEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLLLDEPTSGLDSTTALRIVQMLQHIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLIYFGKASEAMSYFQYIGCSPLITMNPAEFLLDLANGNINDVSVPSELEDKVQMGNLSEAETRNGKPSPALVQEYLVEAYETRVAEXEKKKLLVPIPLDEELKSKVLCSKRQWGASWCEQFSILFLRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKGMQDQAGLLFLIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMAGLRLSAGPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYISFNYHTYKLLLKVQYDEEVTPMINGIRIDSGSTEVVALIAMVFGYRLLAYXSLRWMNVS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3007 731 ProSitePatterns ABC transporters family signature. 282 296 IPR017871 GO:0005524
Amo19g3007 731 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 40 728 - -
Amo19g3007 731 Pfam ABC transporter 158 310 IPR003439 GO:0005524
Amo19g3007 731 Gene3D - 134 376 IPR027417 -
Amo19g3007 731 MobiDBLite consensus disorder prediction 1 47 - -
Amo19g3007 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 135 382 IPR003439 GO:0005524
Amo19g3007 731 Pfam ABC-2 type transporter 339 401 IPR043926 GO:0140359
Amo19g3007 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 40 728 - -
Amo19g3007 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 376 IPR027417 -
Amo19g3007 731 MobiDBLite consensus disorder prediction 1 54 - -
Amo19g3007 731 SMART AAA_5 167 359 IPR003593 -
Amo19g3007 731 Pfam ABC-2 type transporter 478 687 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3007 Amo-Chr19 137226083 137239571 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3007 121 396 Calmodulin-binding Proteins AT2G36910 26.923 3.09e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g3007 K05681 - gmx:100802030 1130.16