Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2973 ATGCATGCTCTTAAGATGGAGGATGCCTTGAAGGCATTGCAGGAAAAGGAAAAAGAACCGGTTGTACCTGAACCAAAACCAGAGCCAACTACTGAAACGTTCATTGATGTTGGTGCATTGAGGAAACATTCTCACAGTCATGGAGAGAGACAATTTGTTTGTAACTATGAGGGGTGCGAAAAGAAATTTCTTGATAGCTCAAAGTTGAAAAGGCATTTTCTCATTCACATAGGGGAGAGGGATTTTGTATGTCCTCATGAAGGTTGTGGTAAGATTCAGATTGAAGTTGAATTGGAAGCTATTGTTGCAAACTGA 315 0.4032 MHALKMEDALKALQEKEKEPVVPEPKPEPTTETFIDVGALRKHSHSHGERQFVCNYEGCEKKFLDSSKLKRHFLIHIGERDFVCPHEGCGKIQIEVELEAIVAN* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2973 104 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 16 91 - -
Amo19g2973 104 MobiDBLite consensus disorder prediction 1 25 - -
Amo19g2973 104 PANTHER TRANSCRIPTION FACTOR YY1-RELATED 16 91 - -
Amo19g2973 104 MobiDBLite consensus disorder prediction 1 31 - -
Amo19g2973 104 Gene3D Classic Zinc Finger 49 81 - -
Amo19g2973 104 SUPERFAMILY beta-beta-alpha zinc fingers 33 89 IPR036236 -
Amo19g2973 104 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 81 IPR013087 -
Amo19g2973 104 SMART c2h2final6 52 76 IPR013087 -
Amo19g2973 104 ProSitePatterns Zinc finger C2H2 type domain signature. 54 76 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2973 4 96 C2H2 Transcription Factor Family AT4G06634 60.952 1.02e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo19g2973 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2973 - - zju:107412546 137.502