Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2946 ATGGAGAATGATGGCAAAGAGTCGTATAAGGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAGTTCCGATGAAAGTAATGATACGGTGGATGTAACTGTAGATGAAGCAGAGGCATATATAATTAATGCTGATGGTTTTGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTAGTATTTGATACAGAATCTCAAGTTTGTGAATTTTACGCCAAATATGCCAAGTGCTATGGATTTGTGTCCCGAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAAGACAGTTGGTTTGCAATAAAGCAGGAGAAAGATATTGGAAGCACCTTAAAAGGGACAATTGGCAAAGGGAGCATAGGGCAATTACTCGTGTCAACTGCAGGGCGAGGATTCGGTTTATTCGTCACTATAGAACGGGCTATTTGAGACTCGTGGATTACCGTGCTCCCACATCTTTCGGGTCTTGA 495 0.4101 MENDGKESYKDGDQSEDLSVEYECSSDESNDTVDVTVDEAEAYIINADGFEKLITDLTIEDIWGLVFDTESQVCEFYAKYAKCYGFVSRKDLKTVDANGNINTRQLVCNKAGERYWKHLKRDNWQREHRAITRVNCRARIRFIRHYRTGYLRLVDYRAPTSFGS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2946 164 MobiDBLite consensus disorder prediction 1 17 - -
Amo19g2946 164 Pfam FAR1 DNA-binding domain 75 145 IPR004330 -
Amo19g2946 164 MobiDBLite consensus disorder prediction 1 31 - -
Amo19g2946 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2946 Amo-Chr19 135405262 135407045 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo19g2946 FAR1 2.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2946 - - aip:110266943 311.227