Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2939 ATGCCTGTATATATCCATCGCGATGTAAAGTCGGAAAATATTTTATTAGACAGAAACTTCCGTGGAGAGGTTGCGGATTTTGGACTGACCAAGCTGATTGATGTTGGAAGCTCATCAGCTCCAACTGCTAATATGGCTGGCACATTCGGCTACATGCCACCAGAATATGTATATCGAAGTGTTTCTCCCAAAATAGATGTATATGCTTTCGGAGTTGTTCTATATGAGCTTATTTCTGCAAAAGAAGCTTTGATGAGGAGTGGTGGTGCATCTGGTGCTGAATTGAAGGGCCTTGTGGCTTTGGTGATTATTAATGACTTTGCTATGGAGTTGCTTCAGATCGAGAAGCAGCGCAAGGACGAAGCTCACAGAGAAGCCCTTAGAGTTCCCAATGAGGAGCGCAAGAAGCTCAAGGCCGTAGCTGCGCAAATCAGGGCTCAGGAGCACAAGATCGCACAACAAGAAGTCAGAGAAACACTCTTAAAAGAAAGAGCTGAGAAACTTGAAAATTGGAGGATGAAGGTCAAAAAGCATGGTGAGAAGATGGCAGAAAAGAAAGAGTTATTGCGTCGACAAAGCTCAATGTGGATCGATGAAGCTAATCTTGAGGCACAAATGATGAAGCTAATCTTGAGGCACAAATATTGGAATCCATCGTTTCCTTTTGCTGAGTCCCTTATATTTCCACATTTGTTATGGTTGGGATCAGTGTTGTGTTATCTGTTACATAGAAGTTATATTTTTGTCCTATGTTCAATCAAGGTTGCATCATCATGCAAATAA 783 0.4189 MPVYIHRDVKSENILLDRNFRGEVADFGLTKLIDVGSSSAPTANMAGTFGYMPPEYVYRSVSPKIDVYAFGVVLYELISAKEALMRSGGASGAELKGLVALVIINDFAMELLQIEKQRKDEAHREALRVPNEERKKLKAVAAQIRAQEHKIAQQEVRETLLKERAEKLENWRMKVKKHGEKMAEKKELLRRQSSMWIDEANLEAQMMKLILRHKYWNPSFPFAESLIFPHLLWLGSVLCYLLHRSYIFVLCSIKVASSCK* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2939 260 SUPERFAMILY Protein kinase-like (PK-like) 4 84 IPR011009 -
Amo19g2939 260 PANTHER LYSM RECEPTOR KINASE 1B 1 102 - -
Amo19g2939 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Amo19g2939 260 Pfam Protein kinase domain 5 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2939 260 Coils Coil 137 157 - -
Amo19g2939 260 Gene3D Transferase(Phosphotransferase) domain 1 1 190 - -
Amo19g2939 260 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 102 IPR044812 GO:0019199|GO:0045087
Amo19g2939 260 ProSiteProfiles Protein kinase domain profile. 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2939 Amo-Chr19 135314021 135315962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2939 1 128 Receptor kinase-like Gene Family AT3G21630 53.906 7.87e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo19g2939 Pkinase 2.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2939 - K13429 aip:107618905 514.998