Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2938 ATGGAAGCTATGTGCCCTTCAAGCAATGGAGGGAAAGGTCTATCCGGTGGCGTTATTGGTGGAATATCTGTTGGAATAGTAGCAGCACTTCTGTTATTGGTATTTTGTGTTTATGTTAAATGTTATAGAAGAAGGAAGATGTGGAACAAAAAATTGGTAGCTAAAGATTCCAGCGAGAACTTTGTTCTCCAAGGCGAAACCTCTCATAATGCCAAAAACAGAACTTCAGCTTCTGATGATACTAGTATTATAGGTGTTAAGGTAGAAAAATCAGCAGAGTTTTCGTATGAGGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAAAAAGATTGGTCAAGGTGGTTTTGGTGAAGTCTATTATGGAGAAAATGGCGAGAGAGCTGCAATTAAGAAGATGGACATGAAAGCATCAAAAGAATTTTTGGCAGAACTGAAAGTGTTGACGCGTGTTCATCACTTAAACTTGGTACGCTGA 480 0.3896 MEAMCPSSNGGKGLSGGVIGGISVGIVAALLLLVFCVYVKCYRRRKMWNKKLVAKDSSENFVLQGETSHNAKNRTSASDDTSIIGVKVEKSAEFSYEELANATNNFSLAKKIGQGGFGEVYYGENGERAAIKKMDMKASKEFLAELKVLTRVHHLNLVR* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2938 159 Pfam Protein tyrosine and serine/threonine kinase 107 159 IPR001245 GO:0004672|GO:0006468
Amo19g2938 159 PANTHER LYSM RECEPTOR KINASE 1B 12 159 - -
Amo19g2938 159 SUPERFAMILY Protein kinase-like (PK-like) 92 159 IPR011009 -
Amo19g2938 159 Gene3D Phosphorylase Kinase; domain 1 75 159 - -
Amo19g2938 159 ProSiteProfiles Protein kinase domain profile. 106 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g2938 159 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 159 IPR044812 GO:0019199|GO:0045087
Amo19g2938 159 ProSitePatterns Protein kinases ATP-binding region signature. 112 133 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2938 Amo-Chr19 135312693 135313776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2938 13 159 Receptor kinase-like Gene Family AT3G21630 51.299 1.40e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo19g2938 PK_Tyr_Ser-Thr 3.3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2938 - K13429 aip:107618905 288.5