Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2934 ATGCTTCGTCCAGCCACCGCCGTCGAACCCACCGCCTTGCTTGCCAGTCATCTCCGGCACTATTTGAACTTTGAAGCCACCGTCGTCGCCGCAACTGGTCTCGCCTCGTTCCTCCATCGCGCAACCACTGTCCTGCCACGCCGTCTCTGTTCCACCGCGTCAGCCCCACCGTCGTGCTCCTTGTCCCGCTCTGGTTCTGAGAATGGTGACACTGTTAACTATGCAACTGTGGTCAGGGAAGTGAAAGCATATTTGAAGAAAGGTGTTGCAGCGAAGGAATTGCAGTCACATATTGTTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTGTTGAAGGATTATTTGATGGCGTCCAAAAAGCGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTAGCTGGAGATGACGAGGGATCACAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGAGTTGAATGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCATGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGATATGGAAGAATGCTCAACCATTCATTGATTGGATTCGGAATGCTGAATCAGAATTGGAGGAAGAATGA 678 0.4867 MLRPATAVEPTALLASHLRHYLNFEATVVAATGLASFLHRATTVLPRRLCSTASAPPSCSLSRSGSENGDTVNYATVVREVKAYLKKGVAAKELQSHIVAFPVSAQEKMNALVEGLFDGVQKAFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFCYKKGSNELNEVALILKALYDVDLVEEEHVVHWYSKGLKGDKKDSQIWKNAQPFIDWIRNAESELEEE* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2934 225 ProSiteProfiles W2 domain profile. 64 225 IPR003307 GO:0005515
Amo19g2934 225 SMART 542_3 133 221 IPR003307 GO:0005515
Amo19g2934 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 64 225 - -
Amo19g2934 225 Gene3D - 69 216 - -
Amo19g2934 225 CDD W2_eIF5 77 221 - -
Amo19g2934 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 64 225 IPR045196 GO:0003743|GO:0006413
Amo19g2934 225 Pfam eIF4-gamma/eIF5/eIF2-epsilon 147 225 IPR003307 GO:0005515
Amo19g2934 225 SUPERFAMILY ARM repeat 73 219 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2934 Amo-Chr19 135228751 135229730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2934 76 218 Eukaryotic Initiation Factors Gene Family AT1G77840 50.000 1.73e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2934 K03262 - ahf:112778866 382.874