Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2909 ATGGCTTTCGCCGTTCTTTTCCTTCTCTTCCTTTCCGTCCCTTTCTCCTCAGCAAAACTCAACCCCGACTACTACAGCGCCACGTGTCCCGACTTCGCCAAAATCGTGAGGGATCAAGTCTTCACGAAGCAGAGCGTGGTCCCGGCCACCGCGGCCGGCGTGCTCCGCCTCTTCTTCCACGACTGCATCACAGACGGCTGTGATGCCTCGATCTTTATATCGTCAAATGCTTACACCCCCCATGCAGAGCGTGATGCTGACCTGAACCTGTCCCTCTCCGGCGATGCCTTCGACCTCGTCATCAAGATCAAGAATTTGTTGGAGCTGACATGCCCTGGCGTAGTGTCTTGCTCGGATATCATTGCACAGGCCACCCGAGACCTCATCAAGATGGTCGGCGGCCCTTATTTTCCGGTCCGGTTAGGGCGGAAAGATAGCCTCAACTCAGACGCATCTAAAGTTCCTGCTAGCCTTCCAACCCCAACCATGACCATGGATGATATAATTAACAAGTTTGCTGCAAGGAAGTTCACAGTAAGGGAAATGGTGGCATTGACCGGAGCACACACCATTGGGTTCACACACTGCAAGGAATTCGCCAACAGAATCTTCAACTTCAGCCCAACCTCCCAAGTAGACCCAACCCTCCACCCTAAGTTCGCGGAGGGTCTAAGACACGTGTGCTGGAACTACACAAAGGACCCATCAATGTCTGCATTCAACGATCCAAGATCACCAAGCAAGTTTGACAACGCCTACTTCGGCAACGTTCTCAAGGGTCTAGGCTTGTTGAGAAGCGACTACCTTCTTGGTGCCGACCCAAGAACAAGGCCCATTGTGGAGGAGTATGCTAAGAATGAACAAGCCTTCTTCAGAGACTTTGCTAAGGCCATGGAGAAGCTTGCTGTTTTGGGTGTCAAGACTGGTAATGCTGGAGAGATCAGGAGTAGGTGTGACCAGTTCAACCACATTCCTGCTTAA 981 0.5189 MAFAVLFLLFLSVPFSSAKLNPDYYSATCPDFAKIVRDQVFTKQSVVPATAAGVLRLFFHDCITDGCDASIFISSNAYTPHAERDADLNLSLSGDAFDLVIKIKNLLELTCPGVVSCSDIIAQATRDLIKMVGGPYFPVRLGRKDSLNSDASKVPASLPTPTMTMDDIINKFAARKFTVREMVALTGAHTIGFTHCKEFANRIFNFSPTSQVDPTLHPKFAEGLRHVCWNYTKDPSMSAFNDPRSPSKFDNAYFGNVLKGLGLLRSDYLLGADPRTRPIVEEYAKNEQAFFRDFAKAMEKLAVLGVKTGNAGEIRSRCDQFNHIPA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2909 326 PANTHER PEROXIDASE 41 4 324 - -
Amo19g2909 326 Gene3D Peroxidase, domain 2 159 301 - -
Amo19g2909 326 CDD secretory_peroxidase 19 321 IPR033905 GO:0004601|GO:0042744
Amo19g2909 326 ProSiteProfiles Plant heme peroxidase family profile. 19 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Amo19g2909 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Amo19g2909 326 PANTHER - 4 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 SUPERFAMILY Heme-dependent peroxidases 20 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 Pfam Peroxidase 47 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 Gene3D - 23 322 - -
Amo19g2909 326 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo19g2909 326 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2909 Amo-Chr19 134553799 134555689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2909 3 324 Peroxidase AT5G47000 56.000 1.62e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2909 K00430 - gmx:100795676 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2909 19 134553799 134555689 Amo09g2641 09 104187566 104189383 hybridization